RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 GH2P01242 217 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 CASTP20810 708 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 IGDCC4Q8TDY8 1250 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 DPF3Q92784 378 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 ZSCAN10Q96SZ4 725 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 WDR18Q9BV38 432 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 PICK1Q9NRD5 415 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 NYAP2Q9P242 653 aa13.68□□□□□ -0.22
CHMP2A-207ENST00000600804 A0A0G2JLL6 359 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 USP17L5A8MUK1 530 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 PRC1O43663 620 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 GDF11O95390 407 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 TTLL1O95922 423 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 ELNP15502 786 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 PTPRAP18433 802 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 LIFRP42702 1097 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 JAG1P78504 1218 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 SEC23AQ15436 765 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 PRRT2Q7Z6L0 340 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 CCDC84Q86UT8 332 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 U2AF1L4Q8WU68 220 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 UBAC1Q9BSL1 405 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
CHMP2A-207ENST00000600804 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 CXCL11O14625 94 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 EVCP57679 992 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 ICA1Q05084 483 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 SEPT2Q15019 361 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 SIAH1Q8IUQ4 282 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 ENAHQ8N8S7 591 aaPredicted RBP13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 PARK7Q99497 189 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 AFG3L2Q9Y4W6 797 aa13.66□□□□□ -0.22
CHMP2A-207ENST00000600804 TNKSO95271 1327 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 ERICH2A1L162 156 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 HOXD10P28358 340 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 RCAN1P53805 252 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 FCGRTP55899 365 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 RAB3GAP1Q15042 981 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 LY9Q9HBG7 655 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 TMX2Q9Y320 296 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 ZHX2Q9Y6X8 837 aa13.65□□□□□ -0.22
CHMP2A-207ENST00000600804 EYSQ5T1H1 3165 aa13.65□□□□□ -0.23
CHMP2A-207ENST00000600804 IFIT3O14879 490 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 ADCY3O60266 1144 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 SGPL1O95470 568 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 INHAP05111 366 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 FLT3LGP49771 235 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 WTAPQ15007 396 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 GMCL1P1Q8NEA9 526 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 UPF3BQ9BZI7 483 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 KIAA1683Q9H0B3 1180 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
CHMP2A-207ENST00000600804 C19orf81C9J6K1 198 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 USP17L10C9JJH3 530 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 NMT2O60551 498 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 NEK4P51957 841 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 USP14P54578 494 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 BACE1P56817 501 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 UBXN2AP68543 259 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 SH3D19Q5HYK7 790 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 TREML2Q5T2D2 321 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 IFIT1BQ5T764 474 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 PAK6Q9NQU5 681 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
CHMP2A-207ENST00000600804 VCANP13611 3396 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 NID2Q14112 1375 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 A0A1W2PRG0 241 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 ST18O60284 1047 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 SNHG28P0DPA3 235 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 CPA1P15085 419 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms