RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
HIF3A-218ENST00000600383 NOM1Q5C9Z4 860 aaKnown RBP17.43■□□□□ 0.38
HIF3A-218ENST00000600383 TATDN1Q6P1N9 297 aa17.43■□□□□ 0.38
HIF3A-218ENST00000600383 MRPS27Q92552 414 aaKnown RBP17.43■□□□□ 0.38
HIF3A-218ENST00000600383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.43■□□□□ 0.38
HIF3A-218ENST00000600383 PSME4Q14997 1843 aa17.43■□□□□ 0.38
HIF3A-218ENST00000600383 WNT10BO00744 389 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
HIF3A-218ENST00000600383 SNW1Q13573 536 aaKnown RBP17.42■□□□□ 0.38
HIF3A-218ENST00000600383 NPY5RQ15761 445 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 RRP36Q96EU6 259 aaKnown RBP17.42■□□□□ 0.38
HIF3A-218ENST00000600383 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 MYOZ2Q9NPC6 264 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 FAM160A1Q05DH4 1040 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 PIGSQ96S52 555 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 KANSL2Q9H9L4 492 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
HIF3A-218ENST00000600383 FER1L6Q2WGJ9 1857 aa17.42■□□□□ 0.38
HIF3A-218ENST00000600383 ATRNL1Q5VV63 1379 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 BRCA1P38398 1863 aaKnown RBP17.41■□□□□ 0.38
HIF3A-218ENST00000600383 A0A1W2PQ27 194 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 A0A1W2PQ64 194 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 A0A1W2PQD8 194 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
HIF3A-218ENST00000600383 PPP6R2O75170 966 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 PRELPP51888 382 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 NDUFA8P51970 172 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-218ENST00000600383 TYW1BQ6NUM6 668 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 PIK3AP1Q6ZUJ8 805 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 KCTD1Q719H9 257 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 CCDC96Q2M329 555 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 SPON1Q9HCB6 807 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 SH3GLB2Q9NR46 395 aa17.41■□□□□ 0.38
HIF3A-218ENST00000600383 GH2P01242 217 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 CALML3P27482 149 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 ICA1Q05084 483 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
HIF3A-218ENST00000600383 ASPRV1Q53RT3 343 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 TMEM179Q6ZVK1 233 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 CDAN1Q8IWY9 1227 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 BLIDQ8IZY5 108 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 ENGASEQ8NFI3 743 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.4■□□□□ 0.38
HIF3A-218ENST00000600383 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
HIF3A-218ENST00000600383 EGFRP00533 1210 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 SNHG28P0DPA3 235 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 SLC16A2P36021 539 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 JAG1P78504 1218 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 METTL16Q86W50 562 aaKnown RBP17.39■□□□□ 0.38
HIF3A-218ENST00000600383 MTMR14Q8NCE2 650 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 RASGRP4Q8TDF6 673 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.38
HIF3A-218ENST00000600383 PCDHA4Q9UN74 947 aa17.39■□□□□ 0.38
HIF3A-218ENST00000600383 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 SIPA1L1O43166 1804 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 TRIM75PA6NK02 468 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 CMA1P23946 247 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 NAPAP54920 295 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 ZNF174Q15697 407 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 SPECC1Q5M775 1068 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 CCDC148Q8NFR7 591 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 TNFRSF25Q93038 417 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 SDF4Q9BRK5 362 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 HERC5Q9UII4 1024 aaKnown RBP17.39■□□□□ 0.37
HIF3A-218ENST00000600383 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
HIF3A-218ENST00000600383 STXBP3O00186 592 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 GMPSP49915 693 aaPredicted RBP17.38■□□□□ 0.37
HIF3A-218ENST00000600383 SIAH1Q8IUQ4 282 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
HIF3A-218ENST00000600383 KRI1Q8N9T8 703 aaKnown RBP17.38■□□□□ 0.37
HIF3A-218ENST00000600383 RIOX1Q9H6W3 641 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 CEP131Q9UPN4 1083 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 PFKFB1P16118 471 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 SHC4Q6S5L8 630 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 MICALL2Q8IY33 904 aa17.38■□□□□ 0.37
HIF3A-218ENST00000600383 ANP32BQ92688 251 aaKnown RBP17.38■□□□□ 0.37
HIF3A-218ENST00000600383 CNOT7Q9UIV1 285 aaKnown RBP17.38■□□□□ 0.37
HIF3A-218ENST00000600383 LTBP3Q9NS15 1303 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 WNT7AO00755 349 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 ZNF202O95125 648 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 SLC1A4P43007 532 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 TBC1D10BQ4KMP7 808 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms