RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 PLA2G12BQ9BX93 195 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 OR52Z1P0C646 297 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 CDK8P49336 464 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 STRN3Q13033 797 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 FNBP1Q96RU3 617 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 ARHGEF28Q8N1W1 1705 aaKnown RBP16.51■□□□□ 0.23
SYMPK-213ENST00000599460 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-213ENST00000599460 NR1I2O75469 434 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 GBP2P32456 591 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-213ENST00000599460 ATG9AQ7Z3C6 839 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 GPHNQ9NQX3 736 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-213ENST00000599460 TMEM63CQ9P1W3 806 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 EXOC7Q9UPT5 735 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 SLC16A2P36021 539 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 CNGA4Q8IV77 575 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 AMNQ9BXJ7 453 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 PCDHA7Q9UN72 937 aa16.51■□□□□ 0.23
SYMPK-213ENST00000599460 GSTTP1A0A1W2PQM5 241 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 CETN3O15182 167 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 ECE2O60344 883 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 ZNF445P59923 1031 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 FANCCQ00597 558 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 KIF5AQ12840 1032 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 ITPK1Q13572 414 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 CLIC6Q96NY7 704 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 BEGAINQ9BUH8 593 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 KDM3AQ9Y4C1 1321 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 AKR1B15C9JRZ8 316 aaPredicted RBP16.5■□□□□ 0.23
SYMPK-213ENST00000599460 AOC3Q16853 763 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 RGS22Q8NE09 1264 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 MRPL44Q9H9J2 332 aaKnown RBP16.5■□□□□ 0.23
SYMPK-213ENST00000599460 TACC1O75410 805 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 LARGE1O95461 756 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 CRKP46108 304 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 BIRC3Q13489 604 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 GNPTABQ3T906 1256 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 NELFBQ8WX92 580 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
SYMPK-213ENST00000599460 GCNT3O95395 438 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
SYMPK-213ENST00000599460 NELFCDQ8IXH7 590 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 SLFN12Q8IYM2 578 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 PTGDRQ13258 359 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 HLTFQ14527 1009 aaKnown RBP eCLIP16.49■□□□□ 0.23
SYMPK-213ENST00000599460 PIGSQ96S52 555 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 KRT86O43790 486 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 CMA1P23946 247 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.23
SYMPK-213ENST00000599460 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 FOXP1Q9H334 677 aaPredicted RBP16.49■□□□□ 0.23
SYMPK-213ENST00000599460 NFE2L3Q9Y4A8 694 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 CACNB3P54284 484 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 NCAPG2Q86XI2 1143 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 ANKRD35Q8N283 1001 aa16.49■□□□□ 0.23
SYMPK-213ENST00000599460 CYP2D6P10635 497 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 CUL4AQ13619 759 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 USP17L2Q6R6M4 530 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 KDM4FA0A1W2PPD8 638 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 GINS2Q9Y248 185 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 SLIT1O75093 1534 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 PDIA6Q15084 440 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 APBB1IPQ7Z5R6 666 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-213ENST00000599460 RASGRP4Q8TDF6 673 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
SYMPK-213ENST00000599460 GUCA1BQ9UMX6 200 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 LIFRP42702 1097 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 KARSQ15046 597 aaKnown RBP16.48■□□□□ 0.23
SYMPK-213ENST00000599460 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-213ENST00000599460 BAG1Q99933 345 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-213ENST00000599460 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 USP14P54578 494 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 TBC1D10CQ8IV04 446 aa16.48■□□□□ 0.23
SYMPK-213ENST00000599460 TRMT44Q8IYL2 757 aaKnown RBP16.48■□□□□ 0.23
SYMPK-213ENST00000599460 SORBS3O60504 671 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 BMP3P12645 472 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 CA8P35219 290 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-213ENST00000599460 PLA2G4DQ86XP0 818 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 SP8Q8IXZ3 490 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 GPBP1Q86WP2 473 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 ERCC3P19447 782 aa16.47■□□□□ 0.23
SYMPK-213ENST00000599460 FOXP4Q8IVH2 680 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms