RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 NCAPG2Q86XI2 1143 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 CCDC17Q96LX7 622 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 SH2D4AQ9H788 454 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 UNC80Q8N2C7 3258 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 ROBO3Q96MS0 1386 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 STRNO43815 780 aa17.64■□□□□ 0.41
IRF3-223ENST00000599223 MAML3Q96JK9 1138 aa17.64■□□□□ 0.41
IRF3-223ENST00000599223 STRBPQ96SI9 672 aaKnown RBP17.64■□□□□ 0.41
IRF3-223ENST00000599223 MROH8Q9H579 483 aa17.64■□□□□ 0.41
IRF3-223ENST00000599223 EPB41L4AQ9HCS5 686 aaPredicted RBP17.64■□□□□ 0.41
IRF3-223ENST00000599223 ADAMTS5Q9UNA0 930 aa17.64■□□□□ 0.41
IRF3-223ENST00000599223 CDH23Q9H251 3354 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 RTP1P59025 263 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 FAM47AQ5JRC9 791 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 FAM83BQ5T0W9 1011 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 ABRAQ8N0Z2 381 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 REPS2Q8NFH8 660 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 OSBP2Q969R2 916 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
IRF3-223ENST00000599223 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
IRF3-223ENST00000599223 ARPP21Q9UBL0 812 aaPredicted RBP17.63■□□□□ 0.41
IRF3-223ENST00000599223 ZNF214Q9UL59 606 aaPredicted RBP17.63■□□□□ 0.41
IRF3-223ENST00000599223 MCM3APO60318 1980 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 GSG1L2A8MUP6 293 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 SEPT4O43236 478 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 PGK2P07205 417 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 RASA1P20936 1047 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 DEFB123Q8N688 67 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
IRF3-223ENST00000599223 KANSL2Q9H9L4 492 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 PPP1R9AQ9ULJ8 1098 aa17.62■□□□□ 0.41
IRF3-223ENST00000599223 VWA5AO00534 786 aa17.61■□□□□ 0.41
IRF3-223ENST00000599223 GPR153Q6NV75 609 aa17.61■□□□□ 0.41
IRF3-223ENST00000599223 KBTBD3Q8NAB2 608 aa17.61■□□□□ 0.41
IRF3-223ENST00000599223 LENG1Q96BZ8 264 aaPredicted RBP17.61■□□□□ 0.41
IRF3-223ENST00000599223 DDRGK1Q96HY6 314 aa17.61■□□□□ 0.41
IRF3-223ENST00000599223 M0R2C6 588 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 RAD21O60216 631 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 FCER1AP12319 257 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 SNX17Q15036 470 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 SBK1Q52WX2 424 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 RIOX2Q8IUF8 465 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 APPBP2Q92624 585 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 MMP19Q99542 508 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 GOPCQ9HD26 462 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 ATP11BQ9Y2G3 1177 aa17.6■□□□□ 0.41
IRF3-223ENST00000599223 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
IRF3-223ENST00000599223 TAL1P17542 331 aaPredicted RBP17.59■□□□□ 0.41
IRF3-223ENST00000599223 LRRC41Q15345 812 aa17.59■□□□□ 0.41
IRF3-223ENST00000599223 TRIM60Q495X7 471 aa17.59■□□□□ 0.41
IRF3-223ENST00000599223 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
IRF3-223ENST00000599223 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 KBTBD13C9JR72 458 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 GPAA1O43292 621 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 SLC25A27O95847 323 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 NDUFB10O96000 172 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 ZNF792Q3KQV3 632 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 SLC39A5Q6ZMH5 540 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 ARRDC4Q8NCT1 418 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
IRF3-223ENST00000599223 FERMT2Q96AC1 680 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 MTMR10Q9NXD2 777 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 CUL9Q8IWT3 2517 aa17.58■□□□□ 0.4
IRF3-223ENST00000599223 MINDY4BA8MYZ0 360 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
IRF3-223ENST00000599223 PRDM1O75626 825 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 STAT3P40763 770 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 ADCYAP1R1P41586 468 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 SLF1Q9BQI6 1058 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 PDLIM7Q9NR12 457 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 SLC5A4Q9NY91 659 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 RIPK3Q9Y572 518 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 LRRC37A2A6NM11 1700 aa17.57■□□□□ 0.4
IRF3-223ENST00000599223 GIMAP6Q6P9H5 292 aa17.56■□□□□ 0.4
IRF3-223ENST00000599223 SH3RF1Q7Z6J0 888 aa17.56■□□□□ 0.4
IRF3-223ENST00000599223 SLC17A8Q8NDX2 589 aa17.56■□□□□ 0.4
IRF3-223ENST00000599223 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
IRF3-223ENST00000599223 LBHD1Q9BQE6 289 aaPredicted RBP17.56■□□□□ 0.4
IRF3-223ENST00000599223 TINF2Q9BSI4 451 aa17.56■□□□□ 0.4
IRF3-223ENST00000599223 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
IRF3-223ENST00000599223 NYAP2Q9P242 653 aa17.56■□□□□ 0.4
IRF3-223ENST00000599223 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 F5H6K3 240 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 PGK1P00558 417 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 ZNF865P0CJ78 1059 aaPredicted RBP17.55■□□□□ 0.4
IRF3-223ENST00000599223 KLRC3Q07444 240 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 KCTD2Q14681 263 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 SNRNP48Q6IEG0 339 aaKnown RBP17.55■□□□□ 0.4
IRF3-223ENST00000599223 LRRC47Q8N1G4 583 aaKnown RBP17.55■□□□□ 0.4
IRF3-223ENST00000599223 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 CEP95Q96GE4 821 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 GPATCH3Q96I76 525 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 TEX13BQ9BXU2 312 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 MKNK2Q9HBH9 465 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 XPNPEP3Q9NQH7 507 aa17.55■□□□□ 0.4
IRF3-223ENST00000599223 PHF24Q9UPV7 400 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms