RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 RPAP2Q8IXW5 612 aaPredicted RBP23.15■■□□□ 1.3
IRF3-222ENST00000599144 MMP19Q99542 508 aa23.15■■□□□ 1.3
IRF3-222ENST00000599144 ATP8A2Q9NTI2 1148 aa23.15■■□□□ 1.3
IRF3-222ENST00000599144 SLC4A4Q9Y6R1 1079 aa23.15■■□□□ 1.3
IRF3-222ENST00000599144 RLFQ13129 1914 aa23.15■■□□□ 1.3
IRF3-222ENST00000599144 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.29
IRF3-222ENST00000599144 PGK1P00558 417 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 ATP5JP18859 108 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 ITGB8P26012 769 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 FAM83BQ5T0W9 1011 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 C16orf86Q6ZW13 317 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 NUP88Q99567 741 aaPredicted RBP23.14■■□□□ 1.29
IRF3-222ENST00000599144 COL25A1Q9BXS0 654 aaPredicted RBP23.14■■□□□ 1.29
IRF3-222ENST00000599144 PUS7LQ9H0K6 701 aaKnown RBP23.14■■□□□ 1.29
IRF3-222ENST00000599144 SH2D4AQ9H788 454 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 ZBTB40Q9NUA8 1239 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 SLC5A4Q9NY91 659 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 ZNF236Q9UL36 1845 aa23.14■■□□□ 1.29
IRF3-222ENST00000599144 HMMRO75330 724 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 TLE2Q04725 743 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 SNX17Q15036 470 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 ZNF697Q5TEC3 545 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 FAM109BQ6ICB4 259 aaPredicted RBP23.13■■□□□ 1.29
IRF3-222ENST00000599144 CTR9Q6PD62 1173 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 ABRAQ8N0Z2 381 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 CCDC17Q96LX7 622 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 HAUS7Q99871 368 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.13■■□□□ 1.29
IRF3-222ENST00000599144 XPNPEP3Q9NQH7 507 aa23.13■■□□□ 1.29
IRF3-222ENST00000599144 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.12■■□□□ 1.298e-8■■■□□ 16.6
IRF3-222ENST00000599144 VWA5AO00534 786 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 STAT3P40763 770 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 EPHB4P54760 987 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 ZNF792Q3KQV3 632 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 RIOX2Q8IUF8 465 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 REPS2Q8NFH8 660 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 CDX2Q99626 313 aaPredicted RBP23.11■■□□□ 1.29
IRF3-222ENST00000599144 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.11■■□□□ 1.292e-6■■■■□ 21.1
IRF3-222ENST00000599144 PPP1R9AQ9ULJ8 1098 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 ADAMTS5Q9UNA0 930 aa23.11■■□□□ 1.29
IRF3-222ENST00000599144 LTBP2Q14767 1821 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 SLC25A27O95847 323 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 RARBP10826 455 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 KCTD2Q14681 263 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 UBE3CQ15386 1083 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 AMOTL1Q8IY63 956 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 TINF2Q9BSI4 451 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 KANSL2Q9H9L4 492 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 ZNF214Q9UL59 606 aaPredicted RBP23.1■■□□□ 1.29
IRF3-222ENST00000599144 DDX19BQ9UMR2 479 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 PHF24Q9UPV7 400 aa23.1■■□□□ 1.29
IRF3-222ENST00000599144 ZBED9Q6R2W3 1325 aa23.09■■□□□ 1.29
IRF3-222ENST00000599144 ZNF865P0CJ78 1059 aaPredicted RBP23.09■■□□□ 1.29
IRF3-222ENST00000599144 IRX5P78411 483 aaPredicted RBP23.09■■□□□ 1.29
IRF3-222ENST00000599144 TTYH1Q9H313 450 aaPredicted RBP23.09■■□□□ 1.29
IRF3-222ENST00000599144 SEMA6BQ9H3T3 888 aa23.09■■□□□ 1.29
IRF3-222ENST00000599144 PQBP1O60828 265 aaKnown RBP23.08■■□□□ 1.29
IRF3-222ENST00000599144 MYLIPQ8WY64 445 aa23.08■■□□□ 1.29
IRF3-222ENST00000599144 GOPCQ9HD26 462 aa23.08■■□□□ 1.29
IRF3-222ENST00000599144 RIPK3Q9Y572 518 aa23.08■■□□□ 1.29
IRF3-222ENST00000599144 C20orf194Q5TEA3 1177 aa23.07■■□□□ 1.28
IRF3-222ENST00000599144 TSHZ3Q63HK5 1081 aa23.07■■□□□ 1.28
IRF3-222ENST00000599144 DDRGK1Q96HY6 314 aa23.07■■□□□ 1.28
IRF3-222ENST00000599144 DNAH12Q6ZR08 3092 aa23.07■■□□□ 1.28
IRF3-222ENST00000599144 BAZ2AQ9UIF9 1905 aaKnown RBP23.06■■□□□ 1.28
IRF3-222ENST00000599144 A0A0C4DFX4 3053 aa23.06■■□□□ 1.28
IRF3-222ENST00000599144 A0A1W2PQ45 241 aaPredicted RBP23.06■■□□□ 1.28
IRF3-222ENST00000599144 A0A1W2PQY0 241 aa23.06■■□□□ 1.28
IRF3-222ENST00000599144 MS4A1P11836 297 aa23.06■■□□□ 1.28
IRF3-222ENST00000599144 RASA1P20936 1047 aa23.06■■□□□ 1.28
IRF3-222ENST00000599144 MYADML2A6NDP7 307 aa23.05■■□□□ 1.28
IRF3-222ENST00000599144 MINDY4BA8MYZ0 360 aa23.05■■□□□ 1.28
IRF3-222ENST00000599144 CLTBP09497 229 aa23.05■■□□□ 1.28
IRF3-222ENST00000599144 SNRNP48Q6IEG0 339 aaKnown RBP23.05■■□□□ 1.28
IRF3-222ENST00000599144 RNF180Q86T96 592 aa23.05■■□□□ 1.28
IRF3-222ENST00000599144 STRBPQ96SI9 672 aaKnown RBP23.05■■□□□ 1.28
IRF3-222ENST00000599144 SLF1Q9BQI6 1058 aa23.05■■□□□ 1.28
IRF3-222ENST00000599144 ADAMTS4O75173 837 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 PRDM1O75626 825 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
IRF3-222ENST00000599144 NDUFB10O96000 172 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 C1orf53Q5VUE5 145 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 CPXCR1Q8N123 301 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 LRRCC1Q9C099 1032 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 ARPP21Q9UBL0 812 aaPredicted RBP23.04■■□□□ 1.28
IRF3-222ENST00000599144 NRBP1Q9UHY1 535 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 ZHX1Q9UKY1 873 aaPredicted RBP23.04■■□□□ 1.28
IRF3-222ENST00000599144 TACC3Q9Y6A5 838 aa23.04■■□□□ 1.28
IRF3-222ENST00000599144 GSG1L2A8MUP6 293 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 F5H6K3 240 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 AKR1A1P14550 325 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 KLRC3Q07444 240 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 MAFAQ8NHW3 353 aaPredicted RBP23.03■■□□□ 1.28
IRF3-222ENST00000599144 OSBP2Q969R2 916 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 CHMP4CQ96CF2 233 aa23.03■■□□□ 1.28
IRF3-222ENST00000599144 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
IRF3-222ENST00000599144 RAVER2Q9HCJ3 691 aaKnown RBP23.03■■□□□ 1.28
IRF3-222ENST00000599144 CNPY2Q9Y2B0 182 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms