RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 FANCBQ8NB91 859 aa25.49■■□□□ 1.67
LTBP4-224ENST00000599016 RBM28Q9NW13 759 aaKnown RBP25.49■■□□□ 1.67
LTBP4-224ENST00000599016 HPS5Q9UPZ3 1129 aa25.49■■□□□ 1.67
LTBP4-224ENST00000599016 TLL2Q9Y6L7 1015 aa25.49■■□□□ 1.67
LTBP4-224ENST00000599016 PTPRFP10586 1907 aa25.49■■□□□ 1.67
LTBP4-224ENST00000599016 NID2Q14112 1375 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 CXCL11O14625 94 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 DHX16O60231 1041 aaKnown RBP25.48■■□□□ 1.67
LTBP4-224ENST00000599016 LARGE1O95461 756 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 PARP1P09874 1014 aaKnown RBP25.48■■□□□ 1.67
LTBP4-224ENST00000599016 CCT2P78371 535 aaKnown RBP25.48■■□□□ 1.67
LTBP4-224ENST00000599016 SAPCD2Q86UD0 394 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 CCDC144CPQ8IYA2 1237 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 CNKSR2Q8WXI2 1034 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 TMOD4Q9NZQ9 345 aa25.48■■□□□ 1.67
LTBP4-224ENST00000599016 NDUFB10O96000 172 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 PDHBP11177 359 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 SLC1A4P43007 532 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 GNAQP50148 359 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 CCDC96Q2M329 555 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 ASPRV1Q53RT3 343 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 CPLX2Q6PUV4 134 aaKnown RBP25.47■■□□□ 1.67
LTBP4-224ENST00000599016 LPAR1Q92633 364 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 GTF3C6Q969F1 213 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 GMCL1Q96IK5 515 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 WNK4Q96J92 1243 aa25.47■■□□□ 1.67
LTBP4-224ENST00000599016 ISY1Q9ULR0 285 aaKnown RBP25.47■■□□□ 1.67
LTBP4-224ENST00000599016 CPLX1O14810 134 aa25.46■■□□□ 1.67
LTBP4-224ENST00000599016 IRF6O14896 467 aa25.46■■□□□ 1.67
LTBP4-224ENST00000599016 SNHG28P0DPA3 235 aa25.46■■□□□ 1.67
LTBP4-224ENST00000599016 GPATCH4Q5T3I0 446 aaKnown RBP25.46■■□□□ 1.67
LTBP4-224ENST00000599016 NECAB1Q8N987 351 aa25.46■■□□□ 1.67
LTBP4-224ENST00000599016 DAXXQ9UER7 740 aaPredicted RBP25.46■■□□□ 1.67
LTBP4-224ENST00000599016 KCNH4Q9UQ05 1017 aa25.46■■□□□ 1.67
LTBP4-224ENST00000599016 BMP3P12645 472 aa25.45■■□□□ 1.66
LTBP4-224ENST00000599016 ZNF157P51786 506 aaPredicted RBP25.45■■□□□ 1.66
LTBP4-224ENST00000599016 HMGCS2P54868 508 aa25.45■■□□□ 1.66
LTBP4-224ENST00000599016 SCRN1Q12765 414 aa25.45■■□□□ 1.66
LTBP4-224ENST00000599016 SH3D19Q5HYK7 790 aa25.45■■□□□ 1.66
LTBP4-224ENST00000599016 RGMBQ6NW40 437 aa25.45■■□□□ 1.66
LTBP4-224ENST00000599016 CCDC83Q8IWF9 413 aa25.45■■□□□ 1.66
LTBP4-224ENST00000599016 WDR46O15213 610 aaKnown RBP25.44■■□□□ 1.66
LTBP4-224ENST00000599016 ZBTB48P10074 688 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-224ENST00000599016 ZNF543Q08ER8 600 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 SNAPC2Q13487 334 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 SPICE1Q8N0Z3 855 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 C12orf42Q96LP6 360 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 LZTS2Q9BRK4 669 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 NCOA5Q9HCD5 579 aaKnown RBP25.44■■□□□ 1.66
LTBP4-224ENST00000599016 EMILIN3Q9NT22 766 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 MAD2L2Q9UI95 211 aa25.44■■□□□ 1.66
LTBP4-224ENST00000599016 PALM3A6NDB9 673 aaPredicted RBP25.43■■□□□ 1.66
LTBP4-224ENST00000599016 HSP90AA1P07900 732 aaKnown RBP25.43■■□□□ 1.66
LTBP4-224ENST00000599016 CDC27P30260 824 aa25.43■■□□□ 1.66
LTBP4-224ENST00000599016 ADD1P35611 737 aaKnown RBP25.43■■□□□ 1.66
LTBP4-224ENST00000599016 SPRYD7Q5W111 196 aa25.43■■□□□ 1.66
LTBP4-224ENST00000599016 HHIPL1Q96JK4 782 aa25.43■■□□□ 1.66
LTBP4-224ENST00000599016 GPCPD1Q9NPB8 672 aa25.43■■□□□ 1.66
LTBP4-224ENST00000599016 FRMPD2Q68DX3 1309 aaPredicted RBP25.42■■□□□ 1.66
LTBP4-224ENST00000599016 LOC285556D6RIA3 1793 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 A0A0G2JLL6 359 aaPredicted RBP25.42■■□□□ 1.66
LTBP4-224ENST00000599016 KLRF2D3W0D1 207 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 CDKL5O76039 1030 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 GOLGA8HP0CJ92 632 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 GJA5P36382 358 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 CUL4AQ13619 759 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 KIAA1755Q5JYT7 1200 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 KCTD1Q719H9 257 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 RASGRP2Q7LDG7 609 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 PRRT2Q7Z6L0 340 aaPredicted RBP25.42■■□□□ 1.66
LTBP4-224ENST00000599016 PROCA1Q8NCQ7 364 aaPredicted RBP25.42■■□□□ 1.66
LTBP4-224ENST00000599016 MCOLN1Q9GZU1 580 aa25.42■■□□□ 1.66
LTBP4-224ENST00000599016 FAM217BQ9NTX9 383 aaPredicted RBP25.42■■□□□ 1.66
LTBP4-224ENST00000599016 GTF2A2P52657 109 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 FAM83BQ5T0W9 1011 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 GADL1Q6ZQY3 521 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 TMTC3Q6ZXV5 915 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 FASTKD5Q7L8L6 764 aaKnown RBP25.41■■□□□ 1.66
LTBP4-224ENST00000599016 RASAL3Q86YV0 1011 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 STAG2Q8N3U4 1231 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 CCDC102AQ96A19 550 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 NUP88Q99567 741 aaPredicted RBP25.41■■□□□ 1.66
LTBP4-224ENST00000599016 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.41■■□□□ 1.66
LTBP4-224ENST00000599016 MYH6P13533 1939 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 THSD7BQ9C0I4 1608 aa25.41■■□□□ 1.66
LTBP4-224ENST00000599016 VCAM1P19320 739 aa25.4■■□□□ 1.66
LTBP4-224ENST00000599016 IKQ13123 557 aaPredicted RBP25.4■■□□□ 1.66
LTBP4-224ENST00000599016 LLPHQ9BRT6 129 aaKnown RBP25.4■■□□□ 1.66
LTBP4-224ENST00000599016 BEGAINQ9BUH8 593 aa25.4■■□□□ 1.66
LTBP4-224ENST00000599016 TMEM232C9JQI7 657 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 CETPP11597 493 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 IFNAR1P17181 557 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 SMARCA1P28370 1054 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 ST3GAL1Q11201 340 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 DGKZQ13574 1117 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 CHURC1Q8WUH1 139 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 INTS4Q96HW7 963 aaKnown RBP25.39■■□□□ 1.66
LTBP4-224ENST00000599016 RPAP3Q9H6T3 665 aaPredicted RBP25.39■■□□□ 1.66
LTBP4-224ENST00000599016 FEM1BQ9UK73 627 aa25.39■■□□□ 1.66
LTBP4-224ENST00000599016 PLEKHA8P1O95397 391 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms