RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ATP2B2Q01814 1243 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 DGKHQ86XP1 1220 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 SHCBP1Q8NEM2 672 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 PXYLP1Q8TE99 480 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 ESR2Q92731 530 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 PORCNQ9H237 461 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 GABRQQ9UN88 632 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 VWA5AO00534 786 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 IGHA2P01877 340 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 XRCC5P13010 732 aaKnown RBP20.83■□□□□ 0.93
USHBP1-209ENST00000598570 PRKCZQ05513 592 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 MORN1Q5T089 497 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 FAM83BQ5T0W9 1011 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 ZNF333Q96JL9 665 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 TANGO6Q9C0B7 1094 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 CNNM2Q9H8M5 875 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 FBXO28Q9NVF7 368 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
USHBP1-209ENST00000598570 TNPO2O14787 897 aaKnown RBP20.82■□□□□ 0.92
USHBP1-209ENST00000598570 FLOT1O75955 427 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 SNHG28P0DPA3 235 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 TOP1P11387 765 aaKnown RBP20.82■□□□□ 0.92
USHBP1-209ENST00000598570 FLT3LGP49771 235 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 CCNA1P78396 465 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 CCDC178Q5BJE1 867 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 SLFN13Q68D06 897 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 PRPF38AQ8NAV1 312 aaKnown RBP20.82■□□□□ 0.92
USHBP1-209ENST00000598570 COA7Q96BR5 231 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 ATG4CQ96DT6 458 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 TMEM47Q9BQJ4 181 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 KRT23Q9C075 422 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 FEM1BQ9UK73 627 aa20.82■□□□□ 0.92
USHBP1-209ENST00000598570 TMEM132BQ14DG7 1078 aa20.81■□□□□ 0.92
USHBP1-209ENST00000598570 NECTIN1Q15223 517 aa20.81■□□□□ 0.92
USHBP1-209ENST00000598570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
USHBP1-209ENST00000598570 NUP88Q99567 741 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-209ENST00000598570 SPATC1LQ9H0A9 340 aa20.81■□□□□ 0.92
USHBP1-209ENST00000598570 ZNF214Q9UL59 606 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-209ENST00000598570 RBBP6Q7Z6E9 1792 aaKnown RBP20.81■□□□□ 0.92
USHBP1-209ENST00000598570 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-209ENST00000598570 HOXC6P09630 235 aa20.8■□□□□ 0.92
USHBP1-209ENST00000598570 FDX1P10109 184 aa20.8■□□□□ 0.92
USHBP1-209ENST00000598570 BTNL9Q6UXG8 535 aa20.8■□□□□ 0.92
USHBP1-209ENST00000598570 GPR142Q7Z601 462 aa20.8■□□□□ 0.92
USHBP1-209ENST00000598570 LRRC47Q8N1G4 583 aaKnown RBP20.8■□□□□ 0.92
USHBP1-209ENST00000598570 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
USHBP1-209ENST00000598570 MOV10L1Q9BXT6 1211 aaKnown RBP20.8■□□□□ 0.92
USHBP1-209ENST00000598570 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
USHBP1-209ENST00000598570 ZNF236Q9UL36 1845 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 STRNO43815 780 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 KDM4AO75164 1064 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 CDC45O75419 566 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 BMP3P12645 472 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 RRP12Q5JTH9 1297 aaKnown RBP20.79■□□□□ 0.92
USHBP1-209ENST00000598570 PLEKHH3Q7Z736 793 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 ABRAQ8N0Z2 381 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 SLAIN1Q8ND83 568 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 DCAF4Q8WV16 495 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 PAGR1Q9BTK6 254 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 MROH8Q9H579 483 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 SLC38A10Q9HBR0 1119 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 RBM8AQ9Y5S9 174 aaKnown RBP20.79■□□□□ 0.92
USHBP1-209ENST00000598570 TAF6LQ9Y6J9 622 aa20.79■□□□□ 0.92
USHBP1-209ENST00000598570 KIAA0100Q14667 2235 aaKnown RBP20.79■□□□□ 0.92
USHBP1-209ENST00000598570 SLC15A5A6NIM6 579 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 B4E1Z4 1266 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 PTPREP23469 700 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 GRK4P32298 578 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 OAZ1P54368 228 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 GRB14Q14449 540 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 SEC23AQ15436 765 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 TSGA10IPQ3SY00 556 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 RIOX2Q8IUF8 465 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 SOCS4Q8WXH5 440 aa20.78■□□□□ 0.92
USHBP1-209ENST00000598570 ZSCAN10Q96SZ4 725 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-209ENST00000598570 E7EWF7 191 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 SLC25A27O95847 323 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 MCCP23508 829 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 SLC9C1Q4G0N8 1177 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 KIAA1211Q6ZU35 1233 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 STOX1Q6ZVD7 989 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 FAM160B2Q86V87 743 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 ENAHQ8N8S7 591 aaPredicted RBP20.77■□□□□ 0.92
USHBP1-209ENST00000598570 RAET1EQ8TD07 263 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 CHURC1Q8WUH1 139 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 MTA3Q9BTC8 594 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 TOMM22Q9NS69 142 aa20.77■□□□□ 0.92
USHBP1-209ENST00000598570 CCDC85CA6NKD9 419 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 ADCY3O60266 1144 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 SLC1A4P43007 532 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 CYB5R4Q7L1T6 521 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 IQCA1Q86XH1 822 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 KCNB2Q92953 911 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 NUDT12Q9BQG2 462 aa20.76■□□□□ 0.91
USHBP1-209ENST00000598570 ZNFX1Q9P2E3 1918 aaKnown RBP20.75■□□□□ 0.91
USHBP1-209ENST00000598570 PDHBP11177 359 aa20.75■□□□□ 0.91
USHBP1-209ENST00000598570 ERCC3P19447 782 aa20.75■□□□□ 0.91
USHBP1-209ENST00000598570 COPB2P35606 906 aa20.75■□□□□ 0.91
USHBP1-209ENST00000598570 STAT3P40763 770 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms