RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 ISY1Q9ULR0 285 aaKnown RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 RPTORQ8N122 1335 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 MGAMO43451 1857 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 F5H6K3 240 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 HIP1O00291 1037 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 CAPN2P17655 700 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 ERCC3P19447 782 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 SDSP20132 328 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 CTDSPL2Q05D32 466 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 KLRC3Q07444 240 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 TRIM32Q13049 653 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 GRB14Q14449 540 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 USP6NLQ92738 828 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 NUP88Q99567 741 aaPredicted RBP17.35■□□□□ 0.37
XRCC1-208ENST00000598422 SLF1Q9BQI6 1058 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 SYNPO2Q9UMS6 1093 aa17.35■□□□□ 0.37
XRCC1-208ENST00000598422 CTDP1Q9Y5B0 961 aaPredicted RBP17.35■□□□□ 0.37
XRCC1-208ENST00000598422 RANBP6O60518 1105 aaKnown RBP17.34■□□□□ 0.37
XRCC1-208ENST00000598422 ALX1Q15699 326 aa17.34■□□□□ 0.37
XRCC1-208ENST00000598422 CCL14Q16627 93 aa17.34■□□□□ 0.37
XRCC1-208ENST00000598422 MFSD14CQ5VZR4 134 aa17.34■□□□□ 0.37
XRCC1-208ENST00000598422 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
XRCC1-208ENST00000598422 MROH8Q9H579 483 aa17.34■□□□□ 0.37
XRCC1-208ENST00000598422 VWA5AO00534 786 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 STRNO43815 780 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 SLC25A27O95847 323 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 HSPD1P10809 573 aaKnown RBP17.33■□□□□ 0.36
XRCC1-208ENST00000598422 COPB2P35606 906 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 TMEM132BQ14DG7 1078 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 DPP9Q86TI2 863 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 GMCL1P1Q8NEA9 526 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 HTATIP2Q9BUP3 242 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 SLC5A4Q9NY91 659 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 ANAPC4Q9UJX5 808 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 STX8Q9UNK0 236 aa17.33■□□□□ 0.36
XRCC1-208ENST00000598422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.33■□□□□ 0.36
XRCC1-208ENST00000598422 ZMYM6O95789 1325 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 FGAP02671 866 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 HOXC6P09630 235 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 ADORA2AP29274 412 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 RRP12Q5JTH9 1297 aaKnown RBP17.32■□□□□ 0.36
XRCC1-208ENST00000598422 MAP3K21Q5TCX8 1036 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 SLFN13Q68D06 897 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
XRCC1-208ENST00000598422 CRISPLD2Q9H0B8 497 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 BRCA2P51587 3418 aa17.32■□□□□ 0.36
XRCC1-208ENST00000598422 FCER1AP12319 257 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 STAT3P40763 770 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 CACNB2Q08289 660 aaPredicted RBP17.31■□□□□ 0.36
XRCC1-208ENST00000598422 MKL1Q969V6 931 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 TEX13BQ9BXU2 312 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 ADAMTS5Q9UNA0 930 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 PDE4DIPQ5VU43 2346 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 MYH8P13535 1937 aa17.31■□□□□ 0.36
XRCC1-208ENST00000598422 ORC4O43929 436 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 HAND2P61296 217 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 IKQ13123 557 aaPredicted RBP17.3■□□□□ 0.36
XRCC1-208ENST00000598422 RIOX2Q8IUF8 465 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 ABRAQ8N0Z2 381 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 PRPF38AQ8NAV1 312 aaKnown RBP17.3■□□□□ 0.36
XRCC1-208ENST00000598422 NPLOC4Q8TAT6 608 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 DPF3Q92784 378 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 KIFC2Q96AC6 838 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 MMP19Q99542 508 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
XRCC1-208ENST00000598422 INCENPQ9NQS7 918 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 FEM1BQ9UK73 627 aa17.3■□□□□ 0.36
XRCC1-208ENST00000598422 ZBED4O75132 1171 aa17.29■□□□□ 0.36
XRCC1-208ENST00000598422 BMP3P12645 472 aa17.29■□□□□ 0.36
XRCC1-208ENST00000598422 SLC1A4P43007 532 aa17.29■□□□□ 0.36
XRCC1-208ENST00000598422 KCTD2Q14681 263 aa17.29■□□□□ 0.36
XRCC1-208ENST00000598422 SNRNP48Q6IEG0 339 aaKnown RBP17.29■□□□□ 0.36
XRCC1-208ENST00000598422 UBE2Q1Q7Z7E8 422 aa17.29■□□□□ 0.36
XRCC1-208ENST00000598422 ANKLE1Q8NAG6 615 aa17.29■□□□□ 0.36
XRCC1-208ENST00000598422 ZNF214Q9UL59 606 aaPredicted RBP17.29■□□□□ 0.36
XRCC1-208ENST00000598422 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 NMT2O60551 498 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 PCP11498 1178 aaKnown RBP17.28■□□□□ 0.36
XRCC1-208ENST00000598422 PDE4AP27815 886 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 CCND3P30281 292 aaPredicted RBP17.28■□□□□ 0.36
XRCC1-208ENST00000598422 CYP2C19P33261 490 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 SLC4A3P48751 1232 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 STAT2P52630 851 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 MFSD6Q6ZSS7 791 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 CPXCR1Q8N123 301 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 REPS2Q8NFH8 660 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 GMCL1Q96IK5 515 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 MTMR7Q9Y216 660 aa17.28■□□□□ 0.36
XRCC1-208ENST00000598422 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
XRCC1-208ENST00000598422 TMEM232C9JQI7 657 aa17.27■□□□□ 0.36
XRCC1-208ENST00000598422 ZNF213O14771 459 aa17.27■□□□□ 0.36
XRCC1-208ENST00000598422 COBLO75128 1261 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms