RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 SCRN1Q12765 414 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 SNAPC2Q13487 334 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 SH3D19Q5HYK7 790 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 RAB11FIP4Q86YS3 637 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 CCDC144CPQ8IYA2 1237 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 C12orf42Q96LP6 360 aa13.4□□□□□ -0.26
SMIM7-216ENST00000598278 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
SMIM7-216ENST00000598278 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
SMIM7-216ENST00000598278 IRF6O14896 467 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 APLP1P51693 650 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 GTF2A2P52657 109 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 HMGCS2P54868 508 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 FASTKD5Q7L8L6 764 aaKnown RBP13.39□□□□□ -0.27
SMIM7-216ENST00000598278 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 PROCA1Q8NCQ7 364 aaPredicted RBP13.39□□□□□ -0.27
SMIM7-216ENST00000598278 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
SMIM7-216ENST00000598278 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
SMIM7-216ENST00000598278 BAZ2BQ9UIF8 2168 aaKnown RBP13.39□□□□□ -0.27
SMIM7-216ENST00000598278 A0A0G2JLL6 359 aaPredicted RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 CETPP11597 493 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 CDC27P30260 824 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 IKQ13123 557 aaPredicted RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 CUL4AQ13619 759 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 TMTC3Q6ZXV5 915 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 PRRT2Q7Z6L0 340 aaPredicted RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 CCDC102AQ96A19 550 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 INTS4Q96HW7 963 aaKnown RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 FEM1BQ9UK73 627 aa13.38□□□□□ -0.27
SMIM7-216ENST00000598278 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
SMIM7-216ENST00000598278 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 PLA2G6O60733 806 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 GOLGA8HP0CJ92 632 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 IFNAR1P17181 557 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 VCAM1P19320 739 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 GJA5P36382 358 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 STAT2P52630 851 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 HMGN5P82970 282 aaKnown RBP13.37□□□□□ -0.27
SMIM7-216ENST00000598278 AKAP17AQ02040 695 aaKnown RBP13.37□□□□□ -0.27
SMIM7-216ENST00000598278 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
SMIM7-216ENST00000598278 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.271e-11■■■■■ 33.3
SMIM7-216ENST00000598278 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 TRIM22Q8IYM9 498 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 STAG2Q8N3U4 1231 aa13.37□□□□□ -0.27
SMIM7-216ENST00000598278 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
SMIM7-216ENST00000598278 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 SLC10A3P09131 477 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
SMIM7-216ENST00000598278 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
SMIM7-216ENST00000598278 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
SMIM7-216ENST00000598278 MANSC4A6NHS7 340 aaPredicted RBP13.35□□□□□ -0.27
SMIM7-216ENST00000598278 PLEKHA8P1O95397 391 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 NTRK3Q16288 839 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 DEFB115Q30KQ5 88 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
SMIM7-216ENST00000598278 RASGRP2Q7LDG7 609 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 CCDC82Q8N4S0 544 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
SMIM7-216ENST00000598278 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
SMIM7-216ENST00000598278 IPO9Q96P70 1041 aaKnown RBP13.35□□□□□ -0.27
SMIM7-216ENST00000598278 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
SMIM7-216ENST00000598278 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 RIOX1Q9H6W3 641 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 AGTPBP1Q9UPW5 1226 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
SMIM7-216ENST00000598278 PARP14Q460N5 1801 aa13.34□□□□□ -0.27
SMIM7-216ENST00000598278 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
SMIM7-216ENST00000598278 PTPDC1A2A3K4 754 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms