RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 FLT3LGP49771 235 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 CCNA1P78396 465 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 SLFN13Q68D06 897 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
UPF1-205ENST00000598209 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 NKX2-3Q8TAU0 364 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 ESR2Q92731 530 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
UPF1-205ENST00000598209 NOVP48745 357 aa16.35■□□□□ 0.21
UPF1-205ENST00000598209 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
UPF1-205ENST00000598209 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
UPF1-205ENST00000598209 ESYT1Q9BSJ8 1104 aa16.35■□□□□ 0.21
UPF1-205ENST00000598209 PPP1R9AQ9ULJ8 1098 aa16.35■□□□□ 0.21
UPF1-205ENST00000598209 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
UPF1-205ENST00000598209 ZNFX1Q9P2E3 1918 aaKnown RBP16.35■□□□□ 0.21
UPF1-205ENST00000598209 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
UPF1-205ENST00000598209 B4E1Z4 1266 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 GRK4P32298 578 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 NT5C2P49902 561 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 SOX10P56693 466 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 IRF5Q13568 498 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 SLF1Q9BQI6 1058 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
UPF1-205ENST00000598209 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
UPF1-205ENST00000598209 ADCY3O60266 1144 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 KDM4AO75164 1064 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 CYP21A2P08686 494 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 TOP1P11387 765 aaKnown RBP16.33■□□□□ 0.2
UPF1-205ENST00000598209 BMP3P12645 472 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 PLS1Q14651 629 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 PLEKHH3Q7Z736 793 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 CHMP4CQ96CF2 233 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 GMCL1Q96IK5 515 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 ZNF333Q96JL9 665 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 MOV10L1Q9BXT6 1211 aaKnown RBP16.33■□□□□ 0.2
UPF1-205ENST00000598209 KRT23Q9C075 422 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
UPF1-205ENST00000598209 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
UPF1-205ENST00000598209 VWA5AO00534 786 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 CDC45O75419 566 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 MCCP23508 829 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 SLC1A4P43007 532 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 RCSD1Q6JBY9 416 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 SOCS4Q8WXH5 440 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 TTC14Q96N46 770 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 NUDT12Q9BQG2 462 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
UPF1-205ENST00000598209 FEM1BQ9UK73 627 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
UPF1-205ENST00000598209 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
UPF1-205ENST00000598209 KIAA0100Q14667 2235 aaKnown RBP16.31■□□□□ 0.2
UPF1-205ENST00000598209 ELNP15502 786 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 MORN1Q5T089 497 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 CASC1Q6TDU7 716 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 RASGRP2Q7LDG7 609 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
UPF1-205ENST00000598209 SHCBP1Q8NEM2 672 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 PXYLP1Q8TE99 480 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 KIFC2Q96AC6 838 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 ZSWIM5Q9P217 1185 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
UPF1-205ENST00000598209 CENPFP49454 3210 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
UPF1-205ENST00000598209 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
UPF1-205ENST00000598209 ERCC3P19447 782 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 CYP2B6P20813 491 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 PTPREP23469 700 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 TAF6LQ9Y6J9 622 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 IVNS1ABPQ9Y6Y0 642 aa16.3■□□□□ 0.2
UPF1-205ENST00000598209 SLC15A5A6NIM6 579 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 SLC25A27O95847 323 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 RGS2P41220 211 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 STAT2P52630 851 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 UBXN2AP68543 259 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 TRDNQ13061 729 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 IKQ13123 557 aaPredicted RBP16.29■□□□□ 0.2
UPF1-205ENST00000598209 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 FAM160B2Q86V87 743 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
UPF1-205ENST00000598209 CHURC1Q8WUH1 139 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms