RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, human

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-208	ENST00000597656	TBC1D8	O95759	1140 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	CYP2C8	P10632	490 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	MCC	P23508	829 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	USP17L24	Q0WX57	530 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	PABPC4	Q13310	644 aa	Known RBP eCLIP	9.83	□□□□□ -0.84	7e-8	■■□□□ 12.8
KHSRP-208	ENST00000597656	CRHR2	Q13324	411 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	POTEE	Q6S8J3	1075 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	CATSPERG	Q6ZRH7	1159 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	DHX32	Q7L7V1	743 aa	Known RBP	9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	CTU1	Q7Z7A3	348 aa	Known RBP	9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	IL17RA	Q96F46	866 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	GMCL1	Q96IK5	515 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	JAKMIP1	Q96N16	626 aa	Known RBP	9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	NUP88	Q99567	741 aa	Predicted RBP	9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	P2RX7	Q99572	595 aa	Known RBP	9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	MTA3	Q9BTC8	594 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	SENP2	Q9HC62	589 aa		9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	GPHN	Q9NQX3	736 aa	Predicted RBP	9.83	□□□□□ -0.84
KHSRP-208	ENST00000597656	WDR46	O15213	610 aa	Known RBP	9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	RAD21	O60216	631 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	TLR2	O60603	784 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	HMGB1	P09429	215 aa	Known RBP	9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	SNHG28	P0DPA3	235 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	CPA1	P15085	419 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	ANAPC15	P60006	121 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	TAF1C	Q15572	869 aa	Predicted RBP	9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	TMEM67	Q5HYA8	995 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	FAM83B	Q5T0W9	1011 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	IFIT1B	Q5T764	474 aa	Known RBP	9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	SLFN13	Q68D06	897 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	RASGRP2	Q7LDG7	609 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	PNMA1	Q8ND90	353 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	TMEM87B	Q96K49	555 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	LRRC2	Q9BYS8	371 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	BACH2	Q9BYV9	841 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	TM6SF1	Q9BZW5	370 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	LY9	Q9HBG7	655 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	ZFYVE28	Q9HCC9	887 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	ZSWIM6	Q9HCJ5	1215 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	FBXO28	Q9NVF7	368 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	WDR19	Q8NEZ3	1342 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	ADGRA2	Q96PE1	1338 aa		9.82	□□□□□ -0.84
KHSRP-208	ENST00000597656	LOC285556	D6RIA3	1793 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	ERICH2	A1L162	156 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	SH2B2	O14492	632 aa	Predicted RBP	9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	PDHB	P11177	359 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	BMP3	P12645	472 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	OSBP	P22059	807 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	RPS6KB1	P23443	525 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	PSMA5	P28066	241 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	LIFR	P42702	1097 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	HERVK_113	P62684	666 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	IRX3	P78415	501 aa	Predicted RBP	9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	C1QBP	Q07021	282 aa	Known RBP	9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	COG2	Q14746	738 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	WTAP	Q15007	396 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	SART3	Q15020	963 aa	Known RBP	9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	BLOC1S2	Q6QNY1	142 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	C17orf99	Q6UX52	265 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	CHMP4C	Q96CF2	233 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	TCEANC2	Q96MN5	208 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	PARK7	Q99497	189 aa	Known RBP	9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	TANGO6	Q9C0B7	1094 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	KAT14	Q9H8E8	782 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	PNMA3	Q9UL41	463 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	MYH8	P13535	1937 aa		9.81	□□□□□ -0.84
KHSRP-208	ENST00000597656	PTPRF	P10586	1907 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	SPDYE16	A6NNV3	312 aa	Predicted RBP	9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	FLOT1	O75955	427 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	CAST	P20810	708 aa	Known RBP	9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	SLC1A4	P43007	532 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	ZNF543	Q08ER8	600 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	TROAP	Q12815	778 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	NOM1	Q5C9Z4	860 aa	Known RBP	9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	LBX2	Q6XYB7	198 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	KCTD1	Q719H9	257 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	RUFY3	Q7L099	469 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	SGMS1	Q86VZ5	419 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	TMTC2	Q8N394	836 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	FBXL16	Q8N461	479 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	SMCR8	Q8TEV9	937 aa	Predicted RBP	9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	DCAF4	Q8WV16	495 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	KIF2C	Q99661	725 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	UPF3B	Q9BZI7	483 aa	Known RBP	9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	HOXC10	Q9NYD6	342 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	RBPJL	Q9UBG7	517 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	CPA4	Q9UI42	421 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	ADAMTS5	Q9UNA0	930 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	MTMR7	Q9Y216	660 aa		9.8	□□□□□ -0.84
KHSRP-208	ENST00000597656	TMEM232	C9JQI7	657 aa		9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	GPR25	O00155	361 aa		9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	PEX10	O60683	326 aa		9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	PLA2G6	O60733	806 aa		9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	BCR	P11274	1271 aa		9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	DSG3	P32926	999 aa		9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	GCLC	P48506	637 aa	Predicted RBP	9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	RBM25	P49756	843 aa	Known RBP	9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	PKN2	Q16513	984 aa	Known RBP	9.79	□□□□□ -0.84
KHSRP-208	ENST00000597656	TTBK2	Q6IQ55	1244 aa		9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms