RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 KIF5BP33176 963 aa24.3■■□□□ 1.48
IRF3-214ENST00000596788 USP14P54578 494 aa24.3■■□□□ 1.48
IRF3-214ENST00000596788 ASPRV1Q53RT3 343 aa24.3■■□□□ 1.48
IRF3-214ENST00000596788 TMTC3Q6ZXV5 915 aa24.3■■□□□ 1.48
IRF3-214ENST00000596788 WNK4Q96J92 1243 aa24.3■■□□□ 1.48
IRF3-214ENST00000596788 EMILIN3Q9NT22 766 aa24.3■■□□□ 1.48
IRF3-214ENST00000596788 IRF6O14896 467 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 SLC1A4P43007 532 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 HMGCS2P54868 508 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 PPP2R5BQ15173 497 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 NTRK3Q16288 839 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 KCTD1Q719H9 257 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 C12orf42Q96LP6 360 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 FOXD4L1Q9NU39 408 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 KCNH4Q9UQ05 1017 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 TLL2Q9Y6L7 1015 aa24.29■■□□□ 1.48
IRF3-214ENST00000596788 CCDC196A0A1B0GTZ2 297 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 C19orf81C9J6K1 198 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 FUT2Q10981 343 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 SLC35G1Q2M3R5 365 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 SH3D19Q5HYK7 790 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 FAM83BQ5T0W9 1011 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 SAPCD2Q86UD0 394 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 CMTR1Q8N1G2 835 aaKnown RBP24.28■■□□□ 1.48
IRF3-214ENST00000596788 NSUN7Q8NE18 718 aaKnown RBP24.28■■□□□ 1.48
IRF3-214ENST00000596788 LPAR1Q92633 364 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 IPO9Q96P70 1041 aaKnown RBP24.28■■□□□ 1.48
IRF3-214ENST00000596788 GPCPD1Q9NPB8 672 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 CNTNAP5Q8WYK1 1306 aa24.28■■□□□ 1.48
IRF3-214ENST00000596788 TMEM88BA6NKF7 163 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 CPLX1O14810 134 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 DHX16O60231 1041 aaKnown RBP24.27■■□□□ 1.48
IRF3-214ENST00000596788 JAK2O60674 1132 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 BMP3P12645 472 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 VCAM1P19320 739 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 GPATCH4Q5T3I0 446 aaKnown RBP24.27■■□□□ 1.48
IRF3-214ENST00000596788 TTBK2Q6IQ55 1244 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 SRBD1Q8N5C6 995 aaKnown RBP24.27■■□□□ 1.48
IRF3-214ENST00000596788 SPRYD3Q8NCJ5 442 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 CPVLQ9H3G5 476 aa24.27■■□□□ 1.48
IRF3-214ENST00000596788 ISY1Q9ULR0 285 aaKnown RBP24.27■■□□□ 1.48
IRF3-214ENST00000596788 RLFQ13129 1914 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 A0A0G2JLL6 359 aaPredicted RBP24.26■■□□□ 1.47
IRF3-214ENST00000596788 PTPDC1A2A3K4 754 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 KLRF2D3W0D1 207 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 CXCL11O14625 94 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 WDR46O15213 610 aaKnown RBP24.26■■□□□ 1.47
IRF3-214ENST00000596788 PPFIA3O75145 1194 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 GNAQP50148 359 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 PRRT2Q7Z6L0 340 aaPredicted RBP24.26■■□□□ 1.47
IRF3-214ENST00000596788 NBPF11Q86T75 865 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 RASAL3Q86YV0 1011 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 SMARCC2Q8TAQ2 1214 aa24.26■■□□□ 1.47
IRF3-214ENST00000596788 INTS4Q96HW7 963 aaKnown RBP24.26■■□□□ 1.47
IRF3-214ENST00000596788 LLPHQ9BRT6 129 aaKnown RBP24.26■■□□□ 1.47
IRF3-214ENST00000596788 HSP90AA1P07900 732 aaKnown RBP24.25■■□□□ 1.47
IRF3-214ENST00000596788 IFNAR1P17181 557 aa24.25■■□□□ 1.47
IRF3-214ENST00000596788 CPLX2Q6PUV4 134 aaKnown RBP24.25■■□□□ 1.47
IRF3-214ENST00000596788 PHKBQ93100 1093 aa24.25■■□□□ 1.47
IRF3-214ENST00000596788 TMOD4Q9NZQ9 345 aa24.25■■□□□ 1.47
IRF3-214ENST00000596788 BAZ2BQ9UIF8 2168 aaKnown RBP24.25■■□□□ 1.47
IRF3-214ENST00000596788 CDKL5O76039 1030 aa24.24■■□□□ 1.47
IRF3-214ENST00000596788 MKRN3Q13064 507 aaKnown RBP24.24■■□□□ 1.47
IRF3-214ENST00000596788 SPRYD7Q5W111 196 aa24.24■■□□□ 1.47
IRF3-214ENST00000596788 CCDC82Q8N4S0 544 aa24.24■■□□□ 1.47
IRF3-214ENST00000596788 LZTS2Q9BRK4 669 aa24.24■■□□□ 1.47
IRF3-214ENST00000596788 SPZ1Q9BXG8 430 aa24.24■■□□□ 1.47
IRF3-214ENST00000596788 ABT1Q9ULW3 272 aaKnown RBP24.24■■□□□ 1.47
IRF3-214ENST00000596788 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.24■■□□□ 1.47
IRF3-214ENST00000596788 CYTH3O43739 400 aa24.23■■□□□ 1.47
IRF3-214ENST00000596788 SLC16A2P36021 539 aa24.23■■□□□ 1.47
IRF3-214ENST00000596788 MOGSQ13724 837 aa24.23■■□□□ 1.47
IRF3-214ENST00000596788 RGMBQ6NW40 437 aa24.23■■□□□ 1.47
IRF3-214ENST00000596788 UBA5Q9GZZ9 404 aa24.23■■□□□ 1.47
IRF3-214ENST00000596788 RPAP3Q9H6T3 665 aaPredicted RBP24.23■■□□□ 1.47
IRF3-214ENST00000596788 DAXXQ9UER7 740 aaPredicted RBP24.23■■□□□ 1.47
IRF3-214ENST00000596788 STK36Q9NRP7 1315 aa24.23■■□□□ 1.47
IRF3-214ENST00000596788 TMEM232C9JQI7 657 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 FMNL1O95466 1100 aaPredicted RBP24.22■■□□□ 1.47
IRF3-214ENST00000596788 ZBTB48P10074 688 aaPredicted RBP24.22■■□□□ 1.47
IRF3-214ENST00000596788 ZNF157P51786 506 aaPredicted RBP24.22■■□□□ 1.47
IRF3-214ENST00000596788 SNAPC2Q13487 334 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 BTNL9Q6UXG8 535 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 GADL1Q6ZQY3 521 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 DDX11Q96FC9 970 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 SLC26A6Q9BXS9 759 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 FBXO28Q9NVF7 368 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 SMC3Q9UQE7 1217 aa24.22■■□□□ 1.47
IRF3-214ENST00000596788 A0A0G2JMZ2 1700 aa24.21■■□□□ 1.47
IRF3-214ENST00000596788 FDPSP14324 419 aaKnown RBP24.21■■□□□ 1.47
IRF3-214ENST00000596788 TREML2Q5T2D2 321 aa24.21■■□□□ 1.47
IRF3-214ENST00000596788 PROCA1Q8NCQ7 364 aaPredicted RBP24.21■■□□□ 1.47
IRF3-214ENST00000596788 TANGO6Q9C0B7 1094 aa24.21■■□□□ 1.47
IRF3-214ENST00000596788 RIOX1Q9H6W3 641 aa24.21■■□□□ 1.47
IRF3-214ENST00000596788 COL11A1P12107 1806 aaPredicted RBP24.2■■□□□ 1.46
IRF3-214ENST00000596788 PLA2G6O60733 806 aa24.2■■□□□ 1.46
IRF3-214ENST00000596788 SLC10A3P09131 477 aa24.2■■□□□ 1.46
IRF3-214ENST00000596788 SMARCA1P28370 1054 aa24.2■■□□□ 1.46
IRF3-214ENST00000596788 GJB2P29033 226 aa24.2■■□□□ 1.46
IRF3-214ENST00000596788 APLP1P51693 650 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms