RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 LIFRP42702 1097 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 INHBEP58166 350 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 FGD1P98174 961 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 CATSPERGQ6ZRH7 1159 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 NOL8Q76FK4 1167 aaKnown RBP18.16■□□□□ 0.5
SMCO4-206ENST00000596676 ZNF654Q8IZM8 581 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 GMCL1Q96IK5 515 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
SMCO4-206ENST00000596676 RNF186Q9NXI6 227 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 KLF18A0A0U1RQI7 1052 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 CCDC69A6NI79 296 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 WDR46O15213 610 aaKnown RBP18.15■□□□□ 0.5
SMCO4-206ENST00000596676 TRPA1O75762 1119 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 SLC16A2P36021 539 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 SLC1A4P43007 532 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 AK2P54819 239 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 SNAP25P60880 206 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 TROAPQ12815 778 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 NUP133Q8WUM0 1156 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 LPAR1Q92633 364 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 UBA5Q9GZZ9 404 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 TSKSQ9UJT2 592 aa18.15■□□□□ 0.5
SMCO4-206ENST00000596676 NAP1L2Q9ULW6 460 aaPredicted RBP18.15■□□□□ 0.5
SMCO4-206ENST00000596676 RLFQ13129 1914 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 DTNBO60941 627 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 HOXA7P31268 230 aaPredicted RBP18.14■□□□□ 0.49
SMCO4-206ENST00000596676 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 TAF1CQ15572 869 aaPredicted RBP18.14■□□□□ 0.49
SMCO4-206ENST00000596676 SLC35G1Q2M3R5 365 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 SGMS1Q86VZ5 419 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 DCAF4Q8WV16 495 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 SYNPO2Q9UMS6 1093 aa18.14■□□□□ 0.49
SMCO4-206ENST00000596676 FLOT1O75955 427 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 CRHR2Q13324 411 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 MICU3Q86XE3 530 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 ATG4CQ96DT6 458 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 HPS5Q9UPZ3 1129 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 SLC12A7Q9Y666 1083 aa18.13■□□□□ 0.49
SMCO4-206ENST00000596676 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
SMCO4-206ENST00000596676 LARGE1O95461 756 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
SMCO4-206ENST00000596676 GRM4Q14833 912 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 CMTR1Q8N1G2 835 aaKnown RBP18.12■□□□□ 0.49
SMCO4-206ENST00000596676 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 WBP1LQ9NX94 342 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 PCNTO95613 3336 aa18.12■□□□□ 0.49
SMCO4-206ENST00000596676 SPDYE16A6NNV3 312 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-206ENST00000596676 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-206ENST00000596676 TAL1P17542 331 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-206ENST00000596676 OSBPP22059 807 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 DSG3P32926 999 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 HERVK_113P62684 666 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-206ENST00000596676 STK3Q13188 491 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 COG2Q14746 738 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-206ENST00000596676 FBXL16Q8N461 479 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 TXNRD2Q9NNW7 524 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-206ENST00000596676 FEM1BQ9UK73 627 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 TPCN1Q9ULQ1 816 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 SLC45A1Q9Y2W3 748 aa18.11■□□□□ 0.49
SMCO4-206ENST00000596676 ADGRA2Q96PE1 1338 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PALM3A6NDB9 673 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 GOLGA8BA8MQT2 603 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 ZBTB43O43298 467 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 CA12O43570 354 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 CNMDO75829 334 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PLEKHA8P1O95397 391 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PDIA3P30101 505 aaKnown RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 CDC27P30260 824 aa18.1■□□□□ 0.49
SMCO4-206ENST00000596676 CCT2P78371 535 aaKnown RBP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 PABPC4Q13310 644 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMCO4-206ENST00000596676 RABEP1Q15276 862 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms