RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TACC3Q9Y6A5 838 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 LCTP09848 1927 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 NDUFB10O96000 172 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 IGHA2P01877 340 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 HOXC6P09630 235 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 ERCC3P19447 782 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 CCND3P30281 292 aaPredicted RBP15.56■□□□□ 0.08
LIG1-212ENST00000596549 NUCB1Q02818 461 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 TMEM132BQ14DG7 1078 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
LIG1-212ENST00000596549 ZNF589Q86UQ0 364 aaPredicted RBP15.56■□□□□ 0.08
LIG1-212ENST00000596549 CHD1LQ86WJ1 897 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 TRMT44Q8IYL2 757 aaKnown RBP15.56■□□□□ 0.08
LIG1-212ENST00000596549 MB21D1Q8N884 522 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 SHCBP1Q8NEM2 672 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 REPS2Q8NFH8 660 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 RWDD1Q9H446 243 aaPredicted RBP15.56■□□□□ 0.08
LIG1-212ENST00000596549 PPP1R9AQ9ULJ8 1098 aa15.56■□□□□ 0.08
LIG1-212ENST00000596549 RAD21O60216 631 aa15.55■□□□□ 0.08
LIG1-212ENST00000596549 TFRCP02786 760 aaKnown RBP15.55■□□□□ 0.08
LIG1-212ENST00000596549 ADORA2AP29274 412 aa15.55■□□□□ 0.08
LIG1-212ENST00000596549 NMIQ13287 307 aaPredicted RBP15.55■□□□□ 0.08
LIG1-212ENST00000596549 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
LIG1-212ENST00000596549 LRRC47Q8N1G4 583 aaKnown RBP15.55■□□□□ 0.08
LIG1-212ENST00000596549 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
LIG1-212ENST00000596549 MTMR4Q9NYA4 1195 aa15.55■□□□□ 0.08
LIG1-212ENST00000596549 ZNF214Q9UL59 606 aaPredicted RBP15.55■□□□□ 0.08
LIG1-212ENST00000596549 IVNS1ABPQ9Y6Y0 642 aa15.55■□□□□ 0.08
LIG1-212ENST00000596549 F5H6K3 240 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 H0YGN5 161 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 CTDSPL2Q05D32 466 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 KLRC3Q07444 240 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 PLS1Q14651 629 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 FAM47AQ5JRC9 791 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 NEDD1Q8NHV4 660 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 PAWRQ96IZ0 340 aaKnown RBP15.54■□□□□ 0.08
LIG1-212ENST00000596549 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 HELLSQ9NRZ9 838 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 OGDHLQ9ULD0 1010 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 MCM3APO60318 1980 aa15.54■□□□□ 0.08
LIG1-212ENST00000596549 ZMYM6O95789 1325 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 VWA5AO00534 786 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 COBLO75128 1261 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 PDE4BQ07343 736 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 NCAPG2Q86XI2 1143 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
LIG1-212ENST00000596549 ANKLE1Q8NAG6 615 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 HTATIP2Q9BUP3 242 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 CLIP2Q9UDT6 1046 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 ANAPC4Q9UJX5 808 aa15.53■□□□□ 0.08
LIG1-212ENST00000596549 LTBP2Q14767 1821 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 PFASO15067 1338 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 TTLL1O95922 423 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 TSPY3P0CV98 308 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 TSPY8P0CW00 308 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 CYBAP13498 195 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 CAPN2P17655 700 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 CYP2C19P33261 490 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 TFAP4Q01664 338 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 MCMDC2Q4G0Z9 681 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 LHX8Q68G74 356 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 RIOX2Q8IUF8 465 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 GMCL1P1Q8NEA9 526 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 TRPV1Q8NER1 839 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 MKL1Q969V6 931 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 MROH8Q9H579 483 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 SYNPO2Q9UMS6 1093 aa15.52■□□□□ 0.08
LIG1-212ENST00000596549 STRNO43815 780 aa15.51■□□□□ 0.07
LIG1-212ENST00000596549 SLC3A2P08195 630 aaKnown RBP15.51■□□□□ 0.07
LIG1-212ENST00000596549 HSPD1P10809 573 aaKnown RBP15.51■□□□□ 0.07
LIG1-212ENST00000596549 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
LIG1-212ENST00000596549 ALX1Q15699 326 aa15.51■□□□□ 0.07
LIG1-212ENST00000596549 DPF3Q92784 378 aa15.51■□□□□ 0.07
LIG1-212ENST00000596549 NBPF3Q9H094 633 aa15.51■□□□□ 0.07
LIG1-212ENST00000596549 IL17RBQ9NRM6 502 aa15.51■□□□□ 0.07
LIG1-212ENST00000596549 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 NMT2O60551 498 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 SLC25A27O95847 323 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 FGAP02671 866 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 FGRP09769 529 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 SDSP20132 328 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 PDE4AP27815 886 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 MFSD14CQ5VZR4 134 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 OLFML2BQ68BL8 750 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 NECAB2Q7Z6G3 386 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 DPP9Q86TI2 863 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 TICAM2Q86XR7 235 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 ABRAQ8N0Z2 381 aa15.5■□□□□ 0.07
LIG1-212ENST00000596549 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 ORC4O43929 436 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 COL6A1P12109 1028 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 STAT3P40763 770 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 NOVP48745 357 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms