RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 EPHX3Q9H6B9 360 aa15.48■□□□□ 0.07
SCAF1-202ENST00000595242 SLC5A4Q9NY91 659 aa15.48■□□□□ 0.07
SCAF1-202ENST00000595242 LRP2BPQ9P2M1 347 aa15.48■□□□□ 0.07
SCAF1-202ENST00000595242 AKAP2Q9Y2D5 859 aa15.48■□□□□ 0.07
SCAF1-202ENST00000595242 PARP14Q460N5 1801 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 PGK1P00558 417 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 UBTFL1P0CB47 393 aaPredicted RBP15.47■□□□□ 0.07
SCAF1-202ENST00000595242 PLCG2P16885 1265 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 TFF2Q03403 129 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 RAB3GAP1Q15042 981 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 NEUROD6Q96NK8 337 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 KIAA1683Q9H0B3 1180 aa15.47■□□□□ 0.07
SCAF1-202ENST00000595242 RPAP3Q9H6T3 665 aaPredicted RBP15.47■□□□□ 0.07
SCAF1-202ENST00000595242 SAP30BPQ9UHR5 308 aaKnown RBP15.47■□□□□ 0.07
SCAF1-202ENST00000595242 HMMRO75330 724 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 GNAI2P04899 355 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 HLA-DOAP06340 250 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 ERCC3P19447 782 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 KCNQ1P51787 676 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 TFCP2Q12800 502 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 AAK1Q2M2I8 961 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 TMEM240Q5SV17 173 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 MFSD5Q6N075 450 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 CCDC174Q6PII3 467 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 ACER1Q8TDN7 264 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 MAML3Q96JK9 1138 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 SPATC1LQ9H0A9 340 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 MSRAQ9UJ68 235 aa15.46■□□□□ 0.07
SCAF1-202ENST00000595242 PPP4CP60510 307 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 PPIGQ13427 754 aaKnown RBP eCLIP15.45■□□□□ 0.063e-10■■■□□ 15.2
SCAF1-202ENST00000595242 COG2Q14746 738 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 RAB30Q15771 203 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 TMEM31Q5JXX7 168 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 GORABQ5T7V8 394 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 NAA16Q6N069 864 aaPredicted RBP15.45■□□□□ 0.06
SCAF1-202ENST00000595242 TATDN1Q6P1N9 297 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 SHCBP1Q8NEM2 672 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 MYH8P13535 1937 aa15.45■□□□□ 0.06
SCAF1-202ENST00000595242 LRRC37A2A6NM11 1700 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 BMP2KLQ5H9B9 411 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 ADGRA1Q86SQ6 560 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 ALYREFQ86V81 257 aaKnown RBP15.44■□□□□ 0.06
SCAF1-202ENST00000595242 DDRGK1Q96HY6 314 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 NKX2-4Q9H2Z4 354 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 SLC28A3Q9HAS3 691 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 STARD7Q9NQZ5 370 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 TBX21Q9UL17 535 aa15.44■□□□□ 0.06
SCAF1-202ENST00000595242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-202ENST00000595242 ACRP10323 421 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 CSF2RAP15509 400 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 ARID4AP29374 1257 aaPredicted RBP15.43■□□□□ 0.06
SCAF1-202ENST00000595242 MCAMP43121 646 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 ACLYP53396 1101 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 NCAPG2Q86XI2 1143 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 ABRAQ8N0Z2 381 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 MICALL1Q8N3F8 863 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 NUP133Q8WUM0 1156 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 MROH8Q9H579 483 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 NRBP1Q9UHY1 535 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 MCM3APO60318 1980 aa15.43■□□□□ 0.06
SCAF1-202ENST00000595242 ATP8B2P98198 1209 aa15.42■□□□□ 0.06
SCAF1-202ENST00000595242 PLS1Q14651 629 aa15.42■□□□□ 0.06
SCAF1-202ENST00000595242 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
SCAF1-202ENST00000595242 CERKLQ49MI3 558 aaPredicted RBP15.42■□□□□ 0.06
SCAF1-202ENST00000595242 PSRC1Q6PGN9 363 aaPredicted RBP15.42■□□□□ 0.06
SCAF1-202ENST00000595242 TMEM199Q8N511 208 aa15.42■□□□□ 0.06
SCAF1-202ENST00000595242 TSEN34Q9BSV6 310 aaKnown RBP15.42■□□□□ 0.06
SCAF1-202ENST00000595242 NOP58Q9Y2X3 529 aaKnown RBP15.42■□□□□ 0.06
SCAF1-202ENST00000595242 ADAMTS4O75173 837 aa15.41■□□□□ 0.06
SCAF1-202ENST00000595242 FCER1AP12319 257 aa15.41■□□□□ 0.06
SCAF1-202ENST00000595242 TAL1P17542 331 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-202ENST00000595242 SKIV2LQ15477 1246 aaKnown RBP15.41■□□□□ 0.06
SCAF1-202ENST00000595242 LENG1Q96BZ8 264 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-202ENST00000595242 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
SCAF1-202ENST00000595242 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
SCAF1-202ENST00000595242 YBX2Q9Y2T7 364 aaKnown RBP15.41■□□□□ 0.06
SCAF1-202ENST00000595242 MROH7Q68CQ1 1323 aa15.41■□□□□ 0.06
SCAF1-202ENST00000595242 ROBO3Q96MS0 1386 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 APBB1O00213 710 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 ERC2O15083 957 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 GPR37L1O60883 481 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 AKR1A1P14550 325 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 HERVK_113Q902F9 699 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 TINF2Q9BSI4 451 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 CABP5Q9NP86 173 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 C11orf16Q9NQ32 467 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
SCAF1-202ENST00000595242 BRWD1Q9NSI6 2320 aa15.39■□□□□ 0.05
SCAF1-202ENST00000595242 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
SCAF1-202ENST00000595242 UQCRFS1P1P0C7P4 283 aa15.39■□□□□ 0.05
SCAF1-202ENST00000595242 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-202ENST00000595242 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
SCAF1-202ENST00000595242 KCNA10Q16322 511 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms