RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
SYNM-204ENST00000594047 SEC24BO95487 1268 aa20.18■□□□□ 0.82
SYNM-204ENST00000594047 TNNC2P02585 160 aa20.18■□□□□ 0.82
SYNM-204ENST00000594047 TYW1BQ6NUM6 668 aa20.18■□□□□ 0.82
SYNM-204ENST00000594047 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
SYNM-204ENST00000594047 ESYT2A0FGR8 921 aa20.18■□□□□ 0.82
SYNM-204ENST00000594047 MGARPQ8TDB4 240 aa20.18■□□□□ 0.82
SYNM-204ENST00000594047 DDX25Q9UHL0 483 aaKnown RBP20.18■□□□□ 0.82
SYNM-204ENST00000594047 ZNF804BA4D1E1 1349 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 CACNB3P54284 484 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 FLAD1Q8NFF5 587 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 PRPF31Q8WWY3 499 aaKnown RBP20.17■□□□□ 0.82
SYNM-204ENST00000594047 P4HA1P13674 534 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 CEP104O60308 925 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 SLC10A4Q96EP9 437 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.17■□□□□ 0.82
SYNM-204ENST00000594047 RILPL1Q5EBL4 403 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 ZSCAN10Q96SZ4 725 aaPredicted RBP20.17■□□□□ 0.82
SYNM-204ENST00000594047 SLITRK6Q9H5Y7 841 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 ARFGAP3Q9NP61 516 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 WDR62O43379 1518 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 E7EWF7 191 aa20.17■□□□□ 0.82
SYNM-204ENST00000594047 NAP1L3Q99457 506 aaPredicted RBP20.17■□□□□ 0.82
SYNM-204ENST00000594047 KLHL40Q2TBA0 621 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 KRT40Q6A162 431 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 U2AF1L4Q8WU68 220 aaKnown RBP20.16■□□□□ 0.82
SYNM-204ENST00000594047 STMN4Q9H169 189 aaPredicted RBP20.16■□□□□ 0.82
SYNM-204ENST00000594047 TNNC1P63316 161 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 HINFPQ9BQA5 517 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 ARPP21Q9UBL0 812 aaPredicted RBP20.16■□□□□ 0.82
SYNM-204ENST00000594047 PIK3CAP42336 1068 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 NLGN1Q8N2Q7 840 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 MRPL11Q9Y3B7 192 aaKnown RBP20.16■□□□□ 0.82
SYNM-204ENST00000594047 RPUSD2Q8IZ73 545 aaKnown RBP20.16■□□□□ 0.82
SYNM-204ENST00000594047 UBL4BQ8N7F7 174 aa20.16■□□□□ 0.82
SYNM-204ENST00000594047 IFNB1P01574 187 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 ATF7P17544 494 aaPredicted RBP20.15■□□□□ 0.82
SYNM-204ENST00000594047 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
SYNM-204ENST00000594047 ZBBXA8MT70 800 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 SND1Q7KZF4 910 aaKnown RBP eCLIP20.15■□□□□ 0.82
SYNM-204ENST00000594047 TACC3Q9Y6A5 838 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 XPAP23025 273 aaPredicted RBP20.15■□□□□ 0.82
SYNM-204ENST00000594047 PLCB4Q15147 1175 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 STAM2O75886 525 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 SLC12A2P55011 1212 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 NOLC1Q14978 699 aaKnown RBP eCLIP20.15■□□□□ 0.82
SYNM-204ENST00000594047 TSGA10Q9BZW7 698 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 MOSPD1Q9UJG1 213 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 MYL5Q02045 173 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 RRAGAQ7L523 313 aa20.15■□□□□ 0.82
SYNM-204ENST00000594047 GPR161Q8N6U8 529 aaKnown RBP20.15■□□□□ 0.82
SYNM-204ENST00000594047 KLRF2D3W0D1 207 aa20.14■□□□□ 0.82
SYNM-204ENST00000594047 TMEM191BP0C7N4 346 aa20.14■□□□□ 0.82
SYNM-204ENST00000594047 VPS37BQ9H9H4 285 aa20.14■□□□□ 0.82
SYNM-204ENST00000594047 ZBTB1Q9Y2K1 713 aa20.14■□□□□ 0.82
SYNM-204ENST00000594047 UTP11Q9Y3A2 253 aaKnown RBP20.14■□□□□ 0.82
SYNM-204ENST00000594047 INO80B-WBP1J3KQ70 363 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 CCDC105Q8IYK2 499 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 ZNF654Q8IZM8 581 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 ANKS4BQ8N8V4 417 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 INO80BQ9C086 356 aaPredicted RBP20.14■□□□□ 0.81
SYNM-204ENST00000594047 CDC37L1Q7L3B6 337 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 RASGRP4Q8TDF6 673 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 POMGNT1Q8WZA1 660 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 OPA1O60313 960 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 TMOD1P28289 359 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 PHKA1P46020 1223 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 TEKT3Q9BXF9 490 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 CACYBPQ9HB71 228 aaKnown RBP20.14■□□□□ 0.81
SYNM-204ENST00000594047 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 IBTKQ9P2D0 1353 aaPredicted RBP20.14■□□□□ 0.81
SYNM-204ENST00000594047 CTAGE3PQ8IX95 158 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 PI4K2BQ8TCG2 481 aa20.14■□□□□ 0.81
SYNM-204ENST00000594047 COL17A1Q9UMD9 1497 aaPredicted RBP20.13■□□□□ 0.81
SYNM-204ENST00000594047 KLHL30Q0D2K2 578 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 DMP1Q13316 513 aaPredicted RBP20.13■□□□□ 0.81
SYNM-204ENST00000594047 LLGL1Q15334 1064 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 CCDC26Q8TAB7 109 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 PANK4Q9NVE7 773 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 BCRP11274 1271 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 RSAD2Q8WXG1 361 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 MEIS1O00470 390 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 SERTAD1Q9UHV2 236 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 PCDHA12Q9UN75 941 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 PAXBP1Q9Y5B6 917 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 UVSSAQ2YD98 709 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 FAM49AQ9H0Q0 323 aaPredicted RBP20.13■□□□□ 0.81
SYNM-204ENST00000594047 CSRNP2Q9H175 543 aa20.13■□□□□ 0.81
SYNM-204ENST00000594047 TLR3O15455 904 aaKnown RBP20.12■□□□□ 0.81
SYNM-204ENST00000594047 C7orf31Q8N865 590 aa20.12■□□□□ 0.81
SYNM-204ENST00000594047 ZNF335Q9H4Z2 1342 aaPredicted RBP20.12■□□□□ 0.81
SYNM-204ENST00000594047 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
SYNM-204ENST00000594047 SCYL1Q96KG9 808 aa20.12■□□□□ 0.81
SYNM-204ENST00000594047 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms