RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SSC5DA1L4H1 1573 aa24.02■■□□□ 1.44
PNKP-203ENST00000593946 ANP32EQ9BTT0 268 aa24.02■■□□□ 1.44
PNKP-203ENST00000593946 GDPD2Q9HCC8 539 aa24.02■■□□□ 1.44
PNKP-203ENST00000593946 GINM1Q9NU53 330 aa24.02■■□□□ 1.44
PNKP-203ENST00000593946 VPS54Q9P1Q0 977 aa24.02■■□□□ 1.44
PNKP-203ENST00000593946 KCNJ14Q9UNX9 436 aa24.02■■□□□ 1.44
PNKP-203ENST00000593946 NCLP19338 710 aaKnown RBP24.01■■□□□ 1.43
PNKP-203ENST00000593946 U2AF2P26368 475 aaKnown RBP eCLIP24.01■■□□□ 1.434e-8■□□□□ 9.6
PNKP-203ENST00000593946 SLFN13Q68D06 897 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 USP50Q70EL3 339 aaPredicted RBP24.01■■□□□ 1.43
PNKP-203ENST00000593946 PIBF1Q8WXW3 757 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 PHF20Q9BVI0 1012 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 F5H6K3 240 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 CTNND1O60716 968 aaKnown RBP24.01■■□□□ 1.43
PNKP-203ENST00000593946 PRPF40AO75400 957 aaKnown RBP24.01■■□□□ 1.43
PNKP-203ENST00000593946 VEGFAP15692 232 aaPredicted RBP24.01■■□□□ 1.43
PNKP-203ENST00000593946 KLRC3Q07444 240 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 PRAMEF18Q5VWM3 479 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 GMCL1Q96IK5 515 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 ZNF341Q9BYN7 854 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.01■■□□□ 1.43
PNKP-203ENST00000593946 ZNF112Q9UJU3 913 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 TMX2Q9Y320 296 aa24.01■■□□□ 1.43
PNKP-203ENST00000593946 EPHX2P34913 555 aa24■■□□□ 1.43
PNKP-203ENST00000593946 SLC1A4P43007 532 aa24■■□□□ 1.43
PNKP-203ENST00000593946 SAFBQ15424 915 aaKnown RBP eCLIP24■■□□□ 1.43
PNKP-203ENST00000593946 CCDC96Q2M329 555 aa24■■□□□ 1.43
PNKP-203ENST00000593946 UBA5Q9GZZ9 404 aa24■■□□□ 1.43
PNKP-203ENST00000593946 GPCPD1Q9NPB8 672 aa24■■□□□ 1.43
PNKP-203ENST00000593946 FIBPO43427 364 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 NDUFB10O96000 172 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 ECE1P42892 770 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 ATL3Q6DD88 541 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 KCTD1Q719H9 257 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 USP48Q86UV5 1035 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 DIS3L2Q8IYB7 885 aaKnown RBP23.99■■□□□ 1.43
PNKP-203ENST00000593946 ACER1Q8TDN7 264 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 DCPSQ96C86 337 aaKnown RBP23.99■■□□□ 1.43
PNKP-203ENST00000593946 RRP36Q96EU6 259 aaKnown RBP23.99■■□□□ 1.43
PNKP-203ENST00000593946 SH3GLB2Q9NR46 395 aa23.99■■□□□ 1.43
PNKP-203ENST00000593946 FOXP1Q9H334 677 aaPredicted RBP23.98■■□□□ 1.43
PNKP-203ENST00000593946 PAPPA2Q9BXP8 1791 aa23.98■■□□□ 1.43
PNKP-203ENST00000593946 PHIPQ8WWQ0 1821 aa23.98■■□□□ 1.43
PNKP-203ENST00000593946 CSPP1Q1MSJ5 1256 aa23.98■■□□□ 1.43
PNKP-203ENST00000593946 SUPT20HL1Q3ZLR7 823 aa23.98■■□□□ 1.43
PNKP-203ENST00000593946 MYSM1Q5VVJ2 828 aa23.98■■□□□ 1.43
PNKP-203ENST00000593946 TTBK2Q6IQ55 1244 aa23.98■■□□□ 1.43
PNKP-203ENST00000593946 ZC3H15Q8WU90 426 aaKnown RBP23.98■■□□□ 1.43
PNKP-203ENST00000593946 SCAND2PQ9GZW5 306 aaPredicted RBP23.98■■□□□ 1.43
PNKP-203ENST00000593946 TFIP11Q9UBB9 837 aaKnown RBP23.98■■□□□ 1.43
PNKP-203ENST00000593946 IQCA1LA6NCM1 817 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 BTBD18B2RXH4 712 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 RAD21O60216 631 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 TRAK2O60296 914 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 INPP5BP32019 993 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 GNL2Q13823 731 aaKnown RBP23.97■■□□□ 1.43
PNKP-203ENST00000593946 NPY5RQ15761 445 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 WWC2Q6AWC2 1192 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 SULF1Q8IWU6 871 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 FAM177A1Q8N128 213 aaPredicted RBP23.97■■□□□ 1.43
PNKP-203ENST00000593946 GPKOWQ92917 476 aaPredicted RBP eCLIP23.97■■□□□ 1.43
PNKP-203ENST00000593946 ZNF396Q96N95 335 aaPredicted RBP23.97■■□□□ 1.43
PNKP-203ENST00000593946 SH2D4AQ9H788 454 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 GOPCQ9HD26 462 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 CFAP45Q9UL16 551 aa23.97■■□□□ 1.43
PNKP-203ENST00000593946 NOSTRINQ8IVI9 506 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 ADGRF4Q8IZF3 695 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 PIGSQ96S52 555 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 TAF1DQ9H5J8 278 aaPredicted RBP23.96■■□□□ 1.43
PNKP-203ENST00000593946 BARHL2Q9NY43 387 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 SEC63Q9UGP8 760 aaKnown RBP23.96■■□□□ 1.43
PNKP-203ENST00000593946 ELP1O95163 1332 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 OTOFQ9HC10 1997 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 POTECB2RU33 542 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 SKOR2Q2VWA4 1001 aaPredicted RBP23.96■■□□□ 1.43
PNKP-203ENST00000593946 HOMER1Q86YM7 354 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 MTMR8Q96EF0 704 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 WRNIP1Q96S55 665 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 JMJD4Q9H9V9 463 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 VAT1LQ9HCJ6 419 aa23.96■■□□□ 1.43
PNKP-203ENST00000593946 STXBP3O00186 592 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 KIAA1755Q5JYT7 1200 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 TYW1BQ6NUM6 668 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 CCDC84Q86UT8 332 aaPredicted RBP23.95■■□□□ 1.42
PNKP-203ENST00000593946 OXER1Q8TDS5 423 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 LEO1Q8WVC0 666 aaPredicted RBP23.95■■□□□ 1.42
PNKP-203ENST00000593946 KLRG1Q96E93 195 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 USP28Q96RU2 1077 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 NUP88Q99567 741 aaPredicted RBP23.95■■□□□ 1.42
PNKP-203ENST00000593946 GLIS2Q9BZE0 524 aaPredicted RBP23.95■■□□□ 1.42
PNKP-203ENST00000593946 VCPKMTQ9H867 229 aa23.95■■□□□ 1.42
PNKP-203ENST00000593946 ADM5C9JUS6 153 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 BMP3P12645 472 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 KRT2P35908 639 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 SLC16A2P36021 539 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 NR5A1Q13285 461 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 KRT26Q7Z3Y9 468 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 HEATR3Q7Z4Q2 680 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 SCYL3Q8IZE3 742 aa23.94■■□□□ 1.42
PNKP-203ENST00000593946 hCG_1984214I3L0E3 225 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms