RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 MYD88Q99836 296 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ANKRD2Q9GZV1 360 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 CHPF2Q9P2E5 772 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ANGPTL2Q9UKU9 493 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 CDV3Q9UKY7 258 aaKnown RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 LRRFIP2Q9Y608 721 aaKnown RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 ZNF236Q9UL36 1845 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ZNF462Q96JM2 2506 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 MROH7Q68CQ1 1323 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 SYNRGQ9UMZ2 1314 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 PIEZO2Q9H5I5 2752 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 MYO18BQ8IUG5 2567 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 ZNFX1Q9P2E3 1918 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 LOC730098B7Z3J9 87 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 ARVCFO00192 962 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 PLIN1O60240 522 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 CTNND1O60716 968 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 COBLO75128 1261 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 TBX10O75333 385 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 CD4P01730 458 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 NCLP19338 710 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 ADORA2AP29274 412 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 GTF2F1P35269 517 aaKnown RBP eCLIP3.98□□□□□ -1.77
VRK3-204ENST00000593912 TRIM28Q13263 835 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 MTMR2Q13614 643 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 RRP1BQ14684 758 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 COL19A1Q14993 1142 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 OLFML2BQ68BL8 750 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 CDC42EP5Q6NZY7 148 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 DPP9Q86TI2 863 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 BANK1Q8NDB2 785 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 ADAM32Q8TC27 787 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 PNISRQ8TF01 805 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 NUP133Q8WUM0 1156 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 RUBCNQ92622 972 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 SLC9A7Q96T83 725 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 HAUS7Q99871 368 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 C17orf80Q9BSJ5 609 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 NOC4LQ9BVI4 516 aaKnown RBP3.98□□□□□ -1.77
VRK3-204ENST00000593912 SMOC2Q9H3U7 446 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 IVNS1ABPQ9Y6Y0 642 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 FANCMQ8IYD8 2048 aa3.98□□□□□ -1.77
VRK3-204ENST00000593912 TEX15Q9BXT5 2789 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 NLRC5Q86WI3 1866 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 TANC1Q9C0D5 1861 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 A0A0U1RQG5 324 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 LINC01553A4QN01 128 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 DDTLA6NHG4 134 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 KIF28PB7ZC32 967 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 TLR3O15455 904 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 LINC01565O15544 149 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 PI15O43692 258 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 GLRX3O76003 335 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 CSPG5O95196 566 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 HSP90B1P14625 803 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 ITGA6P23229 1130 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 HOXA7P31268 230 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 ERVK-21P61565 698 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 DEFB103AP81534 67 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 ZNF200P98182 395 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 HDLBPQ00341 1268 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 SMAD4Q13485 552 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 CBX2Q14781 532 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 PTPN21Q16825 1174 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 SHROOM1Q2M3G4 852 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 SH3D19Q5HYK7 790 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 AMER1Q5JTC6 1135 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 ASTLQ6HA08 431 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 CCSAPQ6IQ19 270 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 RPUSD2Q8IZ73 545 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 KLHDC9Q8NEP7 349 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 FBXO22Q8NEZ5 403 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 RIN2Q8WYP3 895 aaPredicted RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 MRPL38Q96DV4 380 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 RPGRIP1Q96KN7 1286 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 AGBL1Q96MI9 1066 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 GLT1D1Q96MS3 346 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 TGS1Q96RS0 853 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 MPHOSPH8Q99549 860 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 RTKNQ9BST9 563 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 TSEN34Q9BSV6 310 aaKnown RBP3.97□□□□□ -1.77
VRK3-204ENST00000593912 TRPV6Q9H1D0 765 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 BTBD7Q9P203 1132 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 TSPYL4Q9UJ04 414 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 FREM2Q5SZK8 3169 aa3.97□□□□□ -1.77
VRK3-204ENST00000593912 MYO10Q9HD67 2058 aa3.96□□□□□ -1.77
VRK3-204ENST00000593912 PTPN13Q12923 2485 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 ADAMTS20P59510 1910 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 MOXD2PA6NHM9 499 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 SRRM3A6NNA2 597 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 ADCY6O43306 1168 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 HTATSF1O43719 755 aaKnown RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 B4GALT4O60513 344 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 ASGR1P07306 291 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 SP100P23497 879 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 PMLP29590 882 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 RBM25P49756 843 aaKnown RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 RGS3P49796 1198 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 EIF4G2P78344 907 aaKnown RBP eCLIP3.96□□□□□ -1.781e-6■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms