RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 SLC1A4P43007 532 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 ANGEL2Q5VTE6 544 aaKnown RBP17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 DCAF15Q66K64 600 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 PHF20Q9BVI0 1012 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 SH2D4AQ9H788 454 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 SYNPO2Q9UMS6 1093 aa17.18■□□□□ 0.34
GTF2F1-202ENST00000593678 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 GRIN3BO60391 1043 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 DDNO94850 711 aaPredicted RBP17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 EPS15P42566 896 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 SLFN13Q68D06 897 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 CAVIN1Q6NZI2 390 aaKnown RBP17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 HEATR3Q7Z4Q2 680 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 GPT2Q8TD30 523 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 VAT1LQ9HCJ6 419 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 ZBTB21Q9ULJ3 1066 aa17.17■□□□□ 0.34
GTF2F1-202ENST00000593678 GADD45BO75293 160 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 ASNSP08243 561 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 CAP2P40123 477 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 STK38Q15208 465 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 GMCL1P1Q8NEA9 526 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 RTEL1Q9NZ71 1219 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 hCG_1984214I3L0E3 225 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 CYTH3O43739 400 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 GSE1Q14687 1217 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 RILPL1Q5EBL4 403 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 CDAN1Q8IWY9 1227 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 ZNF713Q8N859 430 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 KCNG4Q8TDN1 519 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 GOPCQ9HD26 462 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 PPP2R3BQ9Y5P8 575 aa17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 ASTN2O75129 1339 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-202ENST00000593678 F5H6K3 240 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 YEATS4O95619 227 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 ME1P48163 572 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 KLRC3Q07444 240 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 BICD2Q8TD16 824 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 BARHL2Q9NY43 387 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
GTF2F1-202ENST00000593678 NAPAP54920 295 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 GMCL1Q96IK5 515 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 CPVLQ9H3G5 476 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 RIOX1Q9H6W3 641 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 GINM1Q9NU53 330 aa17.14■□□□□ 0.33
GTF2F1-202ENST00000593678 NR5A1Q13285 461 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 PIGSQ96S52 555 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 ZNF341Q9BYN7 854 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 UTRNP46939 3433 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 GNA11P29992 359 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 NASPP49321 788 aaPredicted RBP17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 C6orf50Q9HD87 102 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
GTF2F1-202ENST00000593678 SPTLC2O15270 562 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 NDUFB10O96000 172 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 BMP3P12645 472 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 JAG1P78504 1218 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 SUPT20HL1Q3ZLR7 823 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 BLIDQ8IZY5 108 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 LINC00301Q8NCQ3 95 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 OXER1Q8TDS5 423 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 FEZ1Q99689 392 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
GTF2F1-202ENST00000593678 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
GTF2F1-202ENST00000593678 STXBP3O00186 592 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms