RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BMP3P12645 472 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 SP3Q02447 781 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 COG2Q14746 738 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 WTAPQ15007 396 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 SEC23AQ15436 765 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 ANKRD13CQ8N6S4 541 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 PNMA1Q8ND90 353 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 ZNF296Q8WUU4 475 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-221ENST00000593026 DCAF4Q8WV16 495 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 MTA3Q9BTC8 594 aa17.52■□□□□ 0.4
DDX39A-221ENST00000593026 SPDYE16A6NNV3 312 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-221ENST00000593026 SEC24BO95487 1268 aa17.51■□□□□ 0.39
DDX39A-221ENST00000593026 HMGB1P09429 215 aaKnown RBP17.51■□□□□ 0.39
DDX39A-221ENST00000593026 BCRP11274 1271 aa17.51■□□□□ 0.39
DDX39A-221ENST00000593026 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-221ENST00000593026 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
DDX39A-221ENST00000593026 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-221ENST00000593026 TMEM87BQ96K49 555 aa17.51■□□□□ 0.39
DDX39A-221ENST00000593026 JAKMIP1Q96N16 626 aaKnown RBP17.51■□□□□ 0.39
DDX39A-221ENST00000593026 FBXO28Q9NVF7 368 aa17.51■□□□□ 0.39
DDX39A-221ENST00000593026 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
DDX39A-221ENST00000593026 MYPNQ86TC9 1320 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 PSMA5P28066 241 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 DSG3P32926 999 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 FAM110CQ1W6H9 321 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 LBX2Q6XYB7 198 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 RASGRP2Q7LDG7 609 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 IGDCC4Q8TDY8 1250 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 PAGR1Q9BTK6 254 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 RLFQ13129 1914 aa17.5■□□□□ 0.39
DDX39A-221ENST00000593026 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 TMEM232C9JQI7 657 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 PDHBP11177 359 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 STAT2P52630 851 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-221ENST00000593026 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 DHX32Q7L7V1 743 aaKnown RBP17.49■□□□□ 0.39
DDX39A-221ENST00000593026 ATG4CQ96DT6 458 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 ERO1AQ96HE7 468 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 SLF1Q9BQI6 1058 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 RBPJLQ9UBG7 517 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 MORF4L1Q9UBU8 362 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
DDX39A-221ENST00000593026 A0A0G2JMZ2 1700 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 SH2B2O14492 632 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-221ENST00000593026 SNHG28P0DPA3 235 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 KIF22Q14807 665 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 BLOC1S2Q6QNY1 142 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 FAM160B2Q86V87 743 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 MB21D1Q8N884 522 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 PRPF38AQ8NAV1 312 aaKnown RBP17.48■□□□□ 0.39
DDX39A-221ENST00000593026 GPRC5AQ8NFJ5 357 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 CD99L2Q8TCZ2 262 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 CHURC1Q8WUH1 139 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 LY9Q9HBG7 655 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 SENP2Q9HC62 589 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 TXNRD2Q9NNW7 524 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 GPHNQ9NQX3 736 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-221ENST00000593026 RABGAP1Q9Y3P9 1069 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 CASP8AP2Q9UKL3 1982 aa17.48■□□□□ 0.39
DDX39A-221ENST00000593026 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-221ENST00000593026 PEX10O60683 326 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 CPA1P15085 419 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
DDX39A-221ENST00000593026 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 ERVK-24P63145 666 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-221ENST00000593026 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
DDX39A-221ENST00000593026 ZNF543Q08ER8 600 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
DDX39A-221ENST00000593026 POTEEQ6S8J3 1075 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 NFXL1Q6ZNB6 911 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 TMTC2Q8N394 836 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 KIFC2Q96AC6 838 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 TCEANC2Q96MN5 208 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 GPCPD1Q9NPB8 672 aa17.47■□□□□ 0.39
DDX39A-221ENST00000593026 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 VWA5AO00534 786 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 PLA2G6O60733 806 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 CNMDO75829 334 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 ECM2O94769 699 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-221ENST00000593026 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 LIFRP42702 1097 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 ANAPC15P60006 121 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 FGD1P98174 961 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 CATIPQ7Z7H3 387 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 BTBD7Q9P203 1132 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 ADAMTS5Q9UNA0 930 aa17.46■□□□□ 0.39
DDX39A-221ENST00000593026 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
DDX39A-221ENST00000593026 ARHGEF6Q15052 776 aa17.45■□□□□ 0.38
DDX39A-221ENST00000593026 ASPRV1Q53RT3 343 aa17.45■□□□□ 0.38
DDX39A-221ENST00000593026 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
DDX39A-221ENST00000593026 ZNF654Q8IZM8 581 aa17.45■□□□□ 0.38
DDX39A-221ENST00000593026 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
DDX39A-221ENST00000593026 CTDP1Q9Y5B0 961 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms