RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 ZNF792Q3KQV3 632 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 KIAA1755Q5JYT7 1200 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 CCSAPQ6IQ19 270 aaPredicted RBP12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 CCDC129Q6ZRS4 1044 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 MMP19Q99542 508 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 C1QTNF1Q9BXJ1 281 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
SMCO4P1-201ENST00000592909 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 GRXCR1A8MXD5 290 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 PGK2P07205 417 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 CDK7P50613 346 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 POLA2Q14181 598 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 MAGEB6Q8N7X4 407 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 ELP1O95163 1332 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
SMCO4P1-201ENST00000592909 BDP1A6H8Y1 2624 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 MPHOSPH10O00566 681 aaKnown RBP12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 KCTD2Q14681 263 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 RAB30Q15771 203 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 KCNA10Q16322 511 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 PSRC1Q6PGN9 363 aaPredicted RBP12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 TMEM179Q6ZVK1 233 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 ZNF365Q70YC5 407 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 RIOX2Q8IUF8 465 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 TMEM199Q8N511 208 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 MSRAQ9UJ68 235 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 TMX2Q9Y320 296 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
SMCO4P1-201ENST00000592909 WDR46O15213 610 aaKnown RBP12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 BMP1P13497 986 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 CSF2RAP15509 400 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 IGFBP4P22692 258 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 COPB2P35606 906 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 HERVK_113Q902F9 699 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 LENG1Q96BZ8 264 aaPredicted RBP12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 FAM184BQ9ULE4 1060 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 SYNGAP1Q96PV0 1343 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
SMCO4P1-201ENST00000592909 DUSP11O75319 330 aaKnown RBP12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 ACRP10323 421 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 STAT3P40763 770 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 EVX2Q03828 476 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 ANTXR1Q9H6X2 564 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 SH2D4AQ9H788 454 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 ARHGEF10LQ9HCE6 1279 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 MCM9Q9NXL9 1143 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
SMCO4P1-201ENST00000592909 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 MAGEB6P1A0A0J9YX57 407 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 ARVCFO00192 962 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 IPO8O15397 1037 aaKnown RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 SURF6O75683 361 aaKnown RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 SNAI1O95863 264 aaPredicted RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 ICA1Q05084 483 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 MAMDC4Q6UXC1 1216 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 CRNKL1Q9BZJ0 848 aaKnown RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 MTIF3Q9H2K0 278 aaKnown RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 SLC28A3Q9HAS3 691 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 IL23AQ9NPF7 189 aa12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
SMCO4P1-201ENST00000592909 MYH1P12882 1939 aa12.27□□□□□ -0.44
SMCO4P1-201ENST00000592909 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 VWA5AO00534 786 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 ASGR1P07306 291 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 TRIM27P14373 513 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 AKR1B1P15121 316 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 AAK1Q2M2I8 961 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 REPS2Q8NFH8 660 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms