RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 ALPK3Q96L96 1907 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 MINDY4BA8MYZ0 360 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 COPB2P35606 906 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 NT5C2P49902 561 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 PDE4BQ07343 736 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 OLFML2BQ68BL8 750 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 DEFB118Q96PH6 123 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
SF3A2-207ENST00000592839 ZNF214Q9UL59 606 aaPredicted RBP17.71■□□□□ 0.43
SF3A2-207ENST00000592839 ORC4O43929 436 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 FLOT1O75955 427 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 FARP2O94887 1054 aaPredicted RBP17.7■□□□□ 0.42
SF3A2-207ENST00000592839 SLC25A27O95847 323 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
SF3A2-207ENST00000592839 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
SF3A2-207ENST00000592839 ZKSCAN1P17029 563 aaPredicted RBP17.7■□□□□ 0.42
SF3A2-207ENST00000592839 CYP2B6P20813 491 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 MNX1P50219 401 aaPredicted RBP17.7■□□□□ 0.42
SF3A2-207ENST00000592839 TRIM32Q13049 653 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 RIOX2Q8IUF8 465 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 ATG4CQ96DT6 458 aa17.7■□□□□ 0.42
SF3A2-207ENST00000592839 ZNFX1Q9P2E3 1918 aaKnown RBP17.7■□□□□ 0.42
SF3A2-207ENST00000592839 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 F5H6K3 240 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 H0YGN5 161 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 VWA5AO00534 786 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 TTLL1O95922 423 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 PCP11498 1178 aaKnown RBP17.69■□□□□ 0.42
SF3A2-207ENST00000592839 KLRC3Q07444 240 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 MCMDC2Q4G0Z9 681 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 CCAR1Q8IX12 1150 aaKnown RBP17.69■□□□□ 0.42
SF3A2-207ENST00000592839 ZNF444Q8N0Y2 327 aaPredicted RBP17.69■□□□□ 0.42
SF3A2-207ENST00000592839 SPICE1Q8N0Z3 855 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 DPF3Q92784 378 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 CEP95Q96GE4 821 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 HTATIP2Q9BUP3 242 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
SF3A2-207ENST00000592839 IVNS1ABPQ9Y6Y0 642 aa17.69■□□□□ 0.42
SF3A2-207ENST00000592839 PLA2G6O60733 806 aa17.68■□□□□ 0.42
SF3A2-207ENST00000592839 NDUFB10O96000 172 aa17.68■□□□□ 0.42
SF3A2-207ENST00000592839 APPP05067 770 aa17.68■□□□□ 0.42
SF3A2-207ENST00000592839 ERCC3P19447 782 aa17.68■□□□□ 0.42
SF3A2-207ENST00000592839 CACNB2Q08289 660 aaPredicted RBP17.68■□□□□ 0.42
SF3A2-207ENST00000592839 TMEM132BQ14DG7 1078 aa17.68■□□□□ 0.42
SF3A2-207ENST00000592839 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
SF3A2-207ENST00000592839 PLXNA1Q9UIW2 1896 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 FDX1P10109 184 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 OAZ1P54368 228 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 CCL14Q16627 93 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 FAM83BQ5T0W9 1011 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 LHX8Q68G74 356 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 CCDC129Q6ZRS4 1044 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 GMCL1Q96IK5 515 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 FAM227BQ96M60 508 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 FLRT1Q9NZU1 646 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 DIS3Q9Y2L1 958 aaKnown RBP17.67■□□□□ 0.42
SF3A2-207ENST00000592839 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
SF3A2-207ENST00000592839 CCDC171Q6TFL3 1326 aa17.67■□□□□ 0.42
SF3A2-207ENST00000592839 MSCO60682 206 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 PRDM1O75626 825 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
SF3A2-207ENST00000592839 COL6A1P12109 1028 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 ADORA2AP29274 412 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 FXR1P51114 621 aaKnown RBP eCLIP17.66■□□□□ 0.42
SF3A2-207ENST00000592839 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
SF3A2-207ENST00000592839 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
SF3A2-207ENST00000592839 NPLOC4Q8TAT6 608 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 SLF1Q9BQI6 1058 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 NRBP1Q9UHY1 535 aa17.66■□□□□ 0.42
SF3A2-207ENST00000592839 FGAP02671 866 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 TSPY3P0CV98 308 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 TSPY8P0CW00 308 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 CYBAP13498 195 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 SDSP20132 328 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 MFSD14CQ5VZR4 134 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 TEX13BQ9BXU2 312 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 SLC38A10Q9HBR0 1119 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 CLIP2Q9UDT6 1046 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 TACC3Q9Y6A5 838 aa17.65■□□□□ 0.42
SF3A2-207ENST00000592839 HIP1O00291 1037 aa17.64■□□□□ 0.41
SF3A2-207ENST00000592839 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
SF3A2-207ENST00000592839 TFAP4Q01664 338 aa17.64■□□□□ 0.41
SF3A2-207ENST00000592839 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
SF3A2-207ENST00000592839 NECAB2Q7Z6G3 386 aa17.64■□□□□ 0.41
SF3A2-207ENST00000592839 IL17RBQ9NRM6 502 aa17.64■□□□□ 0.41
SF3A2-207ENST00000592839 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
SF3A2-207ENST00000592839 FEM1BQ9UK73 627 aa17.64■□□□□ 0.41
SF3A2-207ENST00000592839 COBLO75128 1261 aa17.63■□□□□ 0.41
SF3A2-207ENST00000592839 TFRCP02786 760 aaKnown RBP17.63■□□□□ 0.41
SF3A2-207ENST00000592839 FCER1AP12319 257 aa17.63■□□□□ 0.41
SF3A2-207ENST00000592839 STAT3P40763 770 aa17.63■□□□□ 0.41
SF3A2-207ENST00000592839 ATP2B2Q01814 1243 aa17.63■□□□□ 0.41
SF3A2-207ENST00000592839 MSL3Q8N5Y2 521 aaKnown RBP17.63■□□□□ 0.41
SF3A2-207ENST00000592839 MAML3Q96JK9 1138 aa17.63■□□□□ 0.41
SF3A2-207ENST00000592839 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
SF3A2-207ENST00000592839 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms