RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 BCRP11274 1271 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 CPA1P15085 419 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
TPM4-216ENST00000592822 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
TPM4-216ENST00000592822 COG2Q14746 738 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 IFIT1BQ5T764 474 aaKnown RBP11.67□□□□□ -0.54
TPM4-216ENST00000592822 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
TPM4-216ENST00000592822 PNMA1Q8ND90 353 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 ZNF296Q8WUU4 475 aaPredicted RBP11.67□□□□□ -0.54
TPM4-216ENST00000592822 JAKMIP1Q96N16 626 aaKnown RBP11.67□□□□□ -0.54
TPM4-216ENST00000592822 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 RBPJLQ9UBG7 517 aa11.67□□□□□ -0.54
TPM4-216ENST00000592822 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 WDR19Q8NEZ3 1342 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 COL11A1P12107 1806 aaPredicted RBP11.66□□□□□ -0.54
TPM4-216ENST00000592822 ERICH2A1L162 156 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
TPM4-216ENST00000592822 SH2B2O14492 632 aaPredicted RBP11.66□□□□□ -0.54
TPM4-216ENST00000592822 FLOT1O75955 427 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 HMGB1P09429 215 aaKnown RBP11.66□□□□□ -0.54
TPM4-216ENST00000592822 SNHG28P0DPA3 235 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 PDHBP11177 359 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 BMP3P12645 472 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 DSG3P32926 999 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 WTAPQ15007 396 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 SART3Q15020 963 aaKnown RBP11.66□□□□□ -0.54
TPM4-216ENST00000592822 LBX2Q6XYB7 198 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 KCTD1Q719H9 257 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 DCAF4Q8WV16 495 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 TMEM87BQ96K49 555 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 TCEANC2Q96MN5 208 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 LRRC2Q9BYS8 371 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 LY9Q9HBG7 655 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 TXNRD2Q9NNW7 524 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 HOXC10Q9NYD6 342 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 MORF4L1Q9UBU8 362 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 ADAMTS5Q9UNA0 930 aa11.66□□□□□ -0.54
TPM4-216ENST00000592822 ZSWIM8A7E2V4 1837 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 FKTNO75072 461 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 CNMDO75829 334 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 SLC1A4P43007 532 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 CAP1Q01518 475 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 SP3Q02447 781 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 ZNF543Q08ER8 600 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
TPM4-216ENST00000592822 ATG4CQ96DT6 458 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 SLF1Q9BQI6 1058 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 ZSWIM6Q9HCJ5 1215 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 BTBD7Q9P203 1132 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 FEM1BQ9UK73 627 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 PPP1R9AQ9ULJ8 1098 aa11.65□□□□□ -0.54
TPM4-216ENST00000592822 FRMPD2Q68DX3 1309 aaPredicted RBP11.64□□□□□ -0.55
TPM4-216ENST00000592822 MGAMO43451 1857 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 PLA2G6O60733 806 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 GOLGA8HP0CJ92 632 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
TPM4-216ENST00000592822 RPS6KB1P23443 525 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 PSMA5P28066 241 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 CTGFP29279 349 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 LIFRP42702 1097 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 ANAPC15P60006 121 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 LACTBP83111 547 aaPredicted RBP11.64□□□□□ -0.55
TPM4-216ENST00000592822 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 Q3C1V9 767 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 PRPF38AQ8NAV1 312 aaKnown RBP11.64□□□□□ -0.55
TPM4-216ENST00000592822 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
TPM4-216ENST00000592822 IL17RAQ96F46 866 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 PAGR1Q9BTK6 254 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 ISY1Q9ULR0 285 aaKnown RBP11.64□□□□□ -0.55
TPM4-216ENST00000592822 RABGAP1Q9Y3P9 1069 aa11.64□□□□□ -0.55
TPM4-216ENST00000592822 VWA5AO00534 786 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 SLC16A2P36021 539 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 STAT2P52630 851 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 ERVK-24P63145 666 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 TROAPQ12815 778 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 BTNL9Q6UXG8 535 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 FAM160B2Q86V87 743 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 ZNF654Q8IZM8 581 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 GPRC5AQ8NFJ5 357 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 CHURC1Q8WUH1 139 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 KIFC2Q96AC6 838 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
TPM4-216ENST00000592822 ECM2O94769 699 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms