RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 CXXC1Q9P0U4 656 aaPredicted RBP12.4□□□□□ -0.42
SDF2-209ENST00000591903 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 COBLO75128 1261 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 ERCC3P19447 782 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 IGFBP4P22692 258 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 MCAMP43121 646 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 HDAC1Q13547 482 aaPredicted RBP12.39□□□□□ -0.43
SDF2-209ENST00000591903 ABCB5Q2M3G0 1257 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 PRAMEF19Q5SWL8 479 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 SAP30BPQ9UHR5 308 aaKnown RBP12.39□□□□□ -0.43
SDF2-209ENST00000591903 SERPINB13Q9UIV8 391 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
SDF2-209ENST00000591903 MYH8P13535 1937 aa12.39□□□□□ -0.43
SDF2-209ENST00000591903 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
SDF2-209ENST00000591903 FCER1AP12319 257 aa12.38□□□□□ -0.43
SDF2-209ENST00000591903 CCDC85BQ15834 202 aaPredicted RBP12.38□□□□□ -0.43
SDF2-209ENST00000591903 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
SDF2-209ENST00000591903 PSRC1Q6PGN9 363 aaPredicted RBP12.38□□□□□ -0.43
SDF2-209ENST00000591903 TMEM199Q8N511 208 aa12.38□□□□□ -0.43
SDF2-209ENST00000591903 MTIF3Q9H2K0 278 aaKnown RBP12.38□□□□□ -0.43
SDF2-209ENST00000591903 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
SDF2-209ENST00000591903 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
SDF2-209ENST00000591903 PGK1P00558 417 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 BMP1P13497 986 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 AKR1A1P14550 325 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 PBX2P40425 430 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 ADGRE1Q14246 886 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 TMEM240Q5SV17 173 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 TTC6Q86TZ1 520 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 EXOC6Q8TAG9 804 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 TBX21Q9UL17 535 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 DIS3Q9Y2L1 958 aaKnown RBP12.37□□□□□ -0.43
SDF2-209ENST00000591903 CHD9Q3L8U1 2897 aa12.37□□□□□ -0.43
SDF2-209ENST00000591903 XIRP2A4UGR9 3374 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 PNMA6EA0A0J9YXQ4 647 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 SLC25A27O95847 323 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 USP5P45974 858 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 ACLYP53396 1101 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 ADGRA1Q86SQ6 560 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 LRFN3Q9BTN0 628 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 TANGO6Q9C0B7 1094 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 NAV1Q8NEY1 1877 aa12.36□□□□□ -0.43
SDF2-209ENST00000591903 REV3LO60673 3130 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 ADAMTS4O75173 837 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 PLS1Q14651 629 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 TMEM31Q5JXX7 168 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 CCDC158Q5M9N0 1113 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
SDF2-209ENST00000591903 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 TINF2Q9BSI4 451 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 GPR108Q9NPR9 543 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 PIEZO1Q92508 2521 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 ELP1O95163 1332 aa12.35□□□□□ -0.43
SDF2-209ENST00000591903 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 CSF2RAP15509 400 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 DSG3P32926 999 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 ZNF365Q70YC5 407 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 C16orf59Q7L2K0 433 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
SDF2-209ENST00000591903 GLT1D1Q96MS3 346 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
SDF2-209ENST00000591903 MMP19Q99542 508 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
SDF2-209ENST00000591903 DCTPP1Q9H773 170 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.34□□□□□ -0.43
SDF2-209ENST00000591903 SYNRGQ9UMZ2 1314 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 LRRC37A2A6NM11 1700 aa12.34□□□□□ -0.43
SDF2-209ENST00000591903 APBB1O00213 710 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 ERC2O15083 957 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 TLR3O15455 904 aaKnown RBP12.33□□□□□ -0.44
SDF2-209ENST00000591903 FLOT1O75955 427 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
SDF2-209ENST00000591903 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
SDF2-209ENST00000591903 CST5P28325 142 aaPredicted RBP12.33□□□□□ -0.44
SDF2-209ENST00000591903 COPB2P35606 906 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
SDF2-209ENST00000591903 KCTD2Q14681 263 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
SDF2-209ENST00000591903 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 ZNF512BQ96KM6 892 aaPredicted RBP12.33□□□□□ -0.44
SDF2-209ENST00000591903 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 SNRKQ9NRH2 765 aa12.33□□□□□ -0.44
SDF2-209ENST00000591903 GPR37L1O60883 481 aa12.32□□□□□ -0.44
SDF2-209ENST00000591903 CYP7A1P22680 504 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms