RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 CCDC144CPQ8IYA2 1237 aa25.53■■□□□ 1.68
CROCCP3-206ENST00000591348 CTCFLQ8NI51 663 aaPredicted RBP25.53■■□□□ 1.68
CROCCP3-206ENST00000591348 NUP88Q99567 741 aaPredicted RBP25.53■■□□□ 1.68
CROCCP3-206ENST00000591348 MANSC4A6NHS7 340 aaPredicted RBP25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 GOLGA8AA7E2F4 631 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 PARP1P09874 1014 aaKnown RBP25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 BMP3P12645 472 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 METAP2P50579 478 aaKnown RBP eCLIP25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 FAM83BQ5T0W9 1011 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 MAP3K14Q99558 947 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 KIF5BP33176 963 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 STK3Q13188 491 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 NOGQ13253 232 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 GRM4Q14833 912 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 GPATCH4Q5T3I0 446 aaKnown RBP25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 KCTD1Q719H9 257 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 FANCBQ8NB91 859 aa25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 RPAP3Q9H6T3 665 aaPredicted RBP25.52■■□□□ 1.68
CROCCP3-206ENST00000591348 FRMPD2Q68DX3 1309 aaPredicted RBP25.51■■□□□ 1.67
CROCCP3-206ENST00000591348 ASPRV1Q53RT3 343 aa25.51■■□□□ 1.67
CROCCP3-206ENST00000591348 BRI3BPQ8WY22 251 aa25.51■■□□□ 1.67
CROCCP3-206ENST00000591348 TANGO6Q9C0B7 1094 aa25.51■■□□□ 1.67
CROCCP3-206ENST00000591348 SLKQ9H2G2 1235 aaPredicted RBP25.51■■□□□ 1.67
CROCCP3-206ENST00000591348 HPS5Q9UPZ3 1129 aa25.51■■□□□ 1.67
CROCCP3-206ENST00000591348 GOLGA8HP0CJ92 632 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 ZNF543Q08ER8 600 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 MOGSQ13724 837 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 RTN1Q16799 776 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 TREML2Q5T2D2 321 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 ZSCAN31Q96LW9 406 aaPredicted RBP25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 AGTPBP1Q9UPW5 1226 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 LOC285556D6RIA3 1793 aa25.5■■□□□ 1.67
CROCCP3-206ENST00000591348 ME3Q16798 604 aa25.49■■□□□ 1.67
CROCCP3-206ENST00000591348 GPCPD1Q9NPB8 672 aa25.49■■□□□ 1.67
CROCCP3-206ENST00000591348 MAD2L2Q9UI95 211 aa25.49■■□□□ 1.67
CROCCP3-206ENST00000591348 CCT2P78371 535 aaKnown RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 SREBF2Q12772 1141 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 IKQ13123 557 aaPredicted RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 PPP2R5BQ15173 497 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 SH2B1Q9NRF2 756 aaPredicted RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 RBM28Q9NW13 759 aaKnown RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 CCDC196A0A1B0GTZ2 297 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 TESPA1A2RU30 521 aaPredicted RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 PALM3A6NDB9 673 aaPredicted RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L15C9J2P7 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L13C9JLJ4 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 TMEM232C9JQI7 657 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L11C9JVI0 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L18D6R9N7 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L22D6RA61 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L17D6RBQ6 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L19D6RCP7 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L20D6RJB6 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 LARGE1O95461 756 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 INHBEP58166 350 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 USP17L24Q0WX57 530 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 PABPC4Q13310 644 aaKnown RBP eCLIP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 STAG2Q8N3U4 1231 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 SNX21Q969T3 373 aa25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 WDR33Q9C0J8 1336 aaKnown RBP25.48■■□□□ 1.67
CROCCP3-206ENST00000591348 NID2Q14112 1375 aa25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 PFKFB2O60825 505 aa25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 GNAQP50148 359 aa25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 STAT2P52630 851 aa25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 KIF23Q02241 960 aaPredicted RBP25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 GPAT2Q6NUI2 795 aa25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 FEM1BQ9UK73 627 aa25.47■■□□□ 1.67
CROCCP3-206ENST00000591348 BTBD19C9JJ37 291 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 KLRF2D3W0D1 207 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 AOC2O75106 756 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 FLOT1O75955 427 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 HOXA7P31268 230 aaPredicted RBP25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 VEGFBP49765 207 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 TTBK2Q6IQ55 1244 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 HSCBQ8IWL3 235 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 CHURC1Q8WUH1 139 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 ZIC5Q96T25 663 aa25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 NCOA5Q9HCD5 579 aaKnown RBP25.46■■□□□ 1.67
CROCCP3-206ENST00000591348 CDC27P30260 824 aa25.45■■□□□ 1.67
CROCCP3-206ENST00000591348 SAMD1Q6SPF0 538 aaPredicted RBP25.45■■□□□ 1.67
CROCCP3-206ENST00000591348 CATSPERGQ6ZRH7 1159 aa25.45■■□□□ 1.67
CROCCP3-206ENST00000591348 ANKRD23Q86SG2 305 aa25.45■■□□□ 1.67
CROCCP3-206ENST00000591348 TSHZ2Q9NRE2 1034 aa25.45■■□□□ 1.67
CROCCP3-206ENST00000591348 ADD1P35611 737 aaKnown RBP25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 IRX3P78415 501 aaPredicted RBP25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 SCRN1Q12765 414 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 FAM160B2Q86V87 743 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 NECAB1Q8N987 351 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 GTF3C6Q969F1 213 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 TMX3Q96JJ7 454 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 PTPN18Q99952 460 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 LZTS2Q9BRK4 669 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 FAM217BQ9NTX9 383 aaPredicted RBP25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 FBXO28Q9NVF7 368 aa25.45■■□□□ 1.66
CROCCP3-206ENST00000591348 CPLX1O14810 134 aa25.44■■□□□ 1.66
CROCCP3-206ENST00000591348 DHX16O60231 1041 aaKnown RBP25.44■■□□□ 1.66
CROCCP3-206ENST00000591348 PLA2G6O60733 806 aa25.44■■□□□ 1.66
CROCCP3-206ENST00000591348 PLEKHA8P1O95397 391 aa25.44■■□□□ 1.66
CROCCP3-206ENST00000591348 SLC16A2P36021 539 aa25.44■■□□□ 1.66
CROCCP3-206ENST00000591348 OTUD7BQ6GQQ9 843 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms