RNA–Protein interactions for RNA: ENST00000591123.5

SAFB2-209, Transcript of scaffold attachment factor B2, human

TSL 5

Gene SAFB2, Length 836 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-209	ENST00000591123	ORC3	Q9UBD5	711 aa	Predicted RBP	13.63	□□□□□ -0.23
SAFB2-209	ENST00000591123	MAD2L2	Q9UI95	211 aa		13.63	□□□□□ -0.23
SAFB2-209	ENST00000591123	DHX16	O60231	1041 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	NDUFB10	O96000	172 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	IREB2	P48200	963 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	SSRP1	Q08945	709 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	PKP1	Q13835	747 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	VGLL4	Q14135	290 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	NTRK3	Q16288	839 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	PPP4R3B	Q5MIZ7	849 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	TTBK2	Q6IQ55	1244 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	CPLX2	Q6PUV4	134 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	TMTC3	Q6ZXV5	915 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	SRBD1	Q8N5C6	995 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	SMARCC2	Q8TAQ2	1214 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	MKL1	Q969V6	931 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	CLMN	Q96JQ2	1002 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	AIFM3	Q96NN9	605 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	LLPH	Q9BRT6	129 aa	Known RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	UBA5	Q9GZZ9	404 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	ELP3	Q9H9T3	547 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	VAT1L	Q9HCJ6	419 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	CNTNAP5	Q8WYK1	1306 aa		13.62	□□□□□ -0.23
SAFB2-209	ENST00000591123	MYH15	Q9Y2K3	1946 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	CCDC196	A0A1B0GTZ2	297 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	PALM3	A6NDB9	673 aa	Predicted RBP	13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123		F5H6K3	240 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	CDKL5	O76039	1030 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	FDPS	P14324	419 aa	Known RBP	13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	PTPRA	P18433	802 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	KIF5B	P33176	963 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	SLC16A2	P36021	539 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	RCAN1	P53805	252 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	GUCY1B3	Q02153	619 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	KLRC3	Q07444	240 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	ARMC9	Q7Z3E5	817 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	CWC22	Q9HCG8	908 aa	Known RBP	13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	CSAD	Q9Y600	493 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	SNCAIP	Q9Y6H5	919 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	ZHX2	Q9Y6X8	837 aa		13.61	□□□□□ -0.23
SAFB2-209	ENST00000591123	VPS37C	A5D8V6	355 aa	Predicted RBP	13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	TRIM75P	A6NK02	468 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	KLRF2	D3W0D1	207 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	CELF2	O95319	508 aa	Known RBP	13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	FMNL1	O95466	1100 aa	Predicted RBP	13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	DDIT3	P35638	169 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	SLC1A4	P43007	532 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	HMGN5	P82970	282 aa	Known RBP	13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	ZNF543	Q08ER8	600 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	SPP2	Q13103	211 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	MTMR2	Q13614	643 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	SLC35G1	Q2M3R5	365 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	LARP1B	Q659C4	914 aa	Known RBP	13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	OTUD7B	Q6GQQ9	843 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	CHADL	Q6NUI6	762 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	GOPC	Q9HD26	462 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	GJB4	Q9NTQ9	266 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	TMX2	Q9Y320	296 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	PARP14	Q460N5	1801 aa		13.6	□□□□□ -0.23
SAFB2-209	ENST00000591123	CHRM1	P11229	460 aa	Predicted RBP	13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	IFNAR1	P17181	557 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	SYT1	P21579	422 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	SNAP25	P60880	206 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	AKAP17A	Q02040	695 aa	Known RBP	13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	FUT2	Q10981	343 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	IK	Q13123	557 aa	Predicted RBP	13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	ASPRV1	Q53RT3	343 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	NOL9	Q5SY16	702 aa	Known RBP	13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	FAM83B	Q5T0W9	1011 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	HOMER1	Q86YM7	354 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	TRIM22	Q8IYM9	498 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	GMCL1P1	Q8NEA9	526 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	DCAF4	Q8WV16	495 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	MAP3K14	Q99558	947 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	ALG1	Q9BT22	464 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	VCPKMT	Q9H867	229 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	AS3MT	Q9HBK9	375 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	GINM1	Q9NU53	330 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	CHMP5	Q9NZZ3	219 aa		13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123		V9GY48	417 aa	Predicted RBP	13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	COL11A1	P12107	1806 aa	Predicted RBP	13.59	□□□□□ -0.23
SAFB2-209	ENST00000591123	TCHH	Q07283	1943 aa		13.58	□□□□□ -0.23
SAFB2-209	ENST00000591123	CYTH3	O43739	400 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	SNHG28	P0DPA3	235 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	BMP3	P12645	472 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	GNAQ	P50148	359 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	ANKRD13A	Q8IZ07	590 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	ZNF280C	Q8ND82	737 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	OTUD5	Q96G74	571 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	SH2D4A	Q9H788	454 aa		13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	GBA2	Q9HCG7	927 aa	Predicted RBP	13.58	□□□□□ -0.24
SAFB2-209	ENST00000591123	USP17L10	C9JJH3	530 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	TMEM232	C9JQI7	657 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123		H3BQV1	296 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	KIF3C	O14782	793 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	PRPF3	O43395	683 aa	Known RBP	13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	STX6	O43752	255 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	MNX1	P50219	401 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms