RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 CBX8Q9HC52 389 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 PI4KBQ9UBF8 816 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 CLIP2Q9UDT6 1046 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 FAM196BA6NMK8 535 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 VIL1P09327 827 aaKnown RBP25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 CALML3P27482 149 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 GMLQ99445 158 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 BARHL2Q9NY43 387 aa25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 MORC2Q9Y6X9 1032 aaPredicted RBP25.52■■□□□ 1.68
RUNDC3A-205ENST00000590834 SMARCA1P28370 1054 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 TIGD1Q96MW7 591 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 PIM2Q9P1W9 311 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 NOL7Q9UMY1 257 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 PCDHA4Q9UN74 947 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 SRPRBQ9Y5M8 271 aaKnown RBP25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 STXBP3O00186 592 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 SNHG28P0DPA3 235 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 SPECC1Q5M775 1068 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 PIK3AP1Q6ZUJ8 805 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 LUZP1Q86V48 1076 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 ZSCAN29Q8IWY8 852 aaPredicted RBP25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 BLIDQ8IZY5 108 aa25.51■■□□□ 1.67
RUNDC3A-205ENST00000590834 MPHOSPH10O00566 681 aaKnown RBP25.5■■□□□ 1.67
RUNDC3A-205ENST00000590834 HEATR3Q7Z4Q2 680 aa25.5■■□□□ 1.67
RUNDC3A-205ENST00000590834 CCDC17Q96LX7 622 aa25.5■■□□□ 1.67
RUNDC3A-205ENST00000590834 VPS33BQ9H267 617 aa25.5■■□□□ 1.67
RUNDC3A-205ENST00000590834 M0R2N6 131 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 STX1AQ16623 288 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 MTFR1LQ9H019 292 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 A0A087WWV3 80 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 TTC38Q5R3I4 469 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 SOGA3Q5TF21 947 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 KIAA1468Q9P260 1216 aa25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 FRMPD2Q68DX3 1309 aaPredicted RBP25.49■■□□□ 1.67
RUNDC3A-205ENST00000590834 AP5Z1O43299 807 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 ENTPD3O75355 529 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 ZNF165P49910 485 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 ZNF579Q8NAF0 562 aaKnown RBP25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 UBA5Q9GZZ9 404 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 KCNH3Q9ULD8 1083 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 ATRNL1Q5VV63 1379 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 SHROOM1Q2M3G4 852 aaPredicted RBP25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 C11orf57Q6ZUT1 292 aaPredicted RBP25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 DAGLBQ8NCG7 672 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 CCDC148Q8NFR7 591 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 RIOX1Q9H6W3 641 aa25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 ZBTB12Q9Y330 459 aaPredicted RBP25.48■■□□□ 1.67
RUNDC3A-205ENST00000590834 POLD1P28340 1107 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 CLCN1P35523 988 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 ZNF174Q15697 407 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 ASPRV1Q53RT3 343 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 TATDN1Q6P1N9 297 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 HOMER1Q86YM7 354 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 SPDYE2BA6NHP3 402 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 CAVIN2O95810 425 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 SPDYE6P0CI01 402 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 TRAPPC10P48553 1259 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 METTL16Q86W50 562 aaKnown RBP25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 FOXP4Q8IVH2 680 aaPredicted RBP25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 RASGRP4Q8TDF6 673 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 RRP36Q96EU6 259 aaKnown RBP25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 NAP1L5Q96NT1 182 aaPredicted RBP25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 PIGSQ96S52 555 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 VAT1LQ9HCJ6 419 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 ZNRF3Q9ULT6 936 aa25.47■■□□□ 1.67
RUNDC3A-205ENST00000590834 ADCY5O95622 1261 aa25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 CERKLQ49MI3 558 aaPredicted RBP25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 CSRNP2Q9H175 543 aa25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 MYH4Q9Y623 1939 aa25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 BMP15O95972 392 aa25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 GALNT17Q6IS24 598 aa25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 FAM177A1Q8N128 213 aaPredicted RBP25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 BRCA1P38398 1863 aaKnown RBP25.46■■□□□ 1.67
RUNDC3A-205ENST00000590834 COL2A1P02458 1487 aaPredicted RBP25.45■■□□□ 1.67
RUNDC3A-205ENST00000590834 LONRF3Q496Y0 759 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 NIM1KQ8IY84 436 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 ANO10Q9NW15 660 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 PCDHA6Q9UN73 950 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 PCDHA8Q9Y5H6 950 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 ZNF543Q08ER8 600 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 DALRD3Q5D0E6 543 aaKnown RBP25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 ZMYND12Q9H0C1 365 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 FAM13BQ9NYF5 915 aa25.45■■□□□ 1.66
RUNDC3A-205ENST00000590834 TRIM34Q9BYJ4 488 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 SEC63Q9UGP8 760 aaKnown RBP25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 ATP2C1P98194 919 aaPredicted RBP25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 ATP2B2Q01814 1243 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 IQCB1Q15051 598 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 KRBA2Q6ZNG9 492 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 USP49Q70CQ1 688 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 GPCPD1Q9NPB8 672 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 HDAC9Q9UKV0 1011 aa25.44■■□□□ 1.66
RUNDC3A-205ENST00000590834 NAPAP54920 295 aa25.43■■□□□ 1.66
RUNDC3A-205ENST00000590834 PTGDRQ13258 359 aa25.43■■□□□ 1.66
RUNDC3A-205ENST00000590834 PLCB2Q00722 1185 aa25.42■■□□□ 1.66
RUNDC3A-205ENST00000590834 DLGAP5Q15398 846 aa25.42■■□□□ 1.66
RUNDC3A-205ENST00000590834 PPP4R3BQ5MIZ7 849 aa25.42■■□□□ 1.66
RUNDC3A-205ENST00000590834 OGFOD1Q8N543 542 aa25.42■■□□□ 1.66
RUNDC3A-205ENST00000590834 FERMT2Q96AC1 680 aa25.42■■□□□ 1.66
RUNDC3A-205ENST00000590834 FER1L6Q2WGJ9 1857 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms