RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TREML2Q5T2D2 321 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 GADL1Q6ZQY3 521 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 DNAJC5GQ8N7S2 189 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 ZNF274Q96GC6 653 aaPredicted RBP14.1□□□□□ -0.15
APOC1-206ENST00000590334 ZIC5Q96T25 663 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 SLC12A7Q9Y666 1083 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 PCNTO95613 3336 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 KLF18A0A0U1RQI7 1052 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L15C9J2P7 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 BTBD19C9JJ37 291 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L13C9JLJ4 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L11C9JVI0 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L18D6R9N7 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L22D6RA61 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L17D6RBQ6 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L19D6RCP7 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L20D6RJB6 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 BMP3P12645 472 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 SLC1A4P43007 532 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 ZNF543Q08ER8 600 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 APOBRQ0VD83 1088 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 USP17L24Q0WX57 530 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 PABPC4Q13310 644 aaKnown RBP eCLIP14.09□□□□□ -0.152e-8■■■■■ 46.6
APOC1-206ENST00000590334 GRM4Q14833 912 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 GPATCH4Q5T3I0 446 aaKnown RBP14.09□□□□□ -0.15
APOC1-206ENST00000590334 CATSPERGQ6ZRH7 1159 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
APOC1-206ENST00000590334 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
APOC1-206ENST00000590334 PALM3A6NDB9 673 aaPredicted RBP14.08□□□□□ -0.16
APOC1-206ENST00000590334 IGF2BP3O00425 579 aaKnown RBP eCLIP14.08□□□□□ -0.16
APOC1-206ENST00000590334 ZBTB43O43298 467 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 ST18O60284 1047 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 GRM1Q13255 1194 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 PPP2R5BQ15173 497 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 BTNL9Q6UXG8 535 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 RASGRP2Q7LDG7 609 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 FAM43AQ8N2R8 423 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 NUP88Q99567 741 aaPredicted RBP14.08□□□□□ -0.16
APOC1-206ENST00000590334 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 MYPNQ86TC9 1320 aa14.08□□□□□ -0.16
APOC1-206ENST00000590334 PDHXO00330 501 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 RAD21O60216 631 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
APOC1-206ENST00000590334 PDIA3P30101 505 aaKnown RBP14.07□□□□□ -0.16
APOC1-206ENST00000590334 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 FANCBQ8NB91 859 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 MYL10Q9BUA6 226 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 FEM1BQ9UK73 627 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 TPCN1Q9ULQ1 816 aa14.07□□□□□ -0.16
APOC1-206ENST00000590334 GOLGA8BA8MQT2 603 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 KIF5BP33176 963 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 MCM2P49736 904 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 STAT2P52630 851 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 COG2Q14746 738 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 CCDC96Q2M329 555 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 KCTD1Q719H9 257 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 FAM160B2Q86V87 743 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 STAG2Q8N3U4 1231 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 PRPF38AQ8NAV1 312 aaKnown RBP14.06□□□□□ -0.16
APOC1-206ENST00000590334 CTCFLQ8NI51 663 aaPredicted RBP14.06□□□□□ -0.16
APOC1-206ENST00000590334 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 TANGO6Q9C0B7 1094 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 ASCC2Q9H1I8 757 aaPredicted RBP14.06□□□□□ -0.16
APOC1-206ENST00000590334 FAM217BQ9NTX9 383 aaPredicted RBP14.06□□□□□ -0.16
APOC1-206ENST00000590334 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 ADAMTS5Q9UNA0 930 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 LIMCH1Q9UPQ0 1083 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
APOC1-206ENST00000590334 RBBP6Q7Z6E9 1792 aaKnown RBP14.05□□□□□ -0.16
APOC1-206ENST00000590334 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 KLRF2D3W0D1 207 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
APOC1-206ENST00000590334 OSBPP22059 807 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 SMARCA1P28370 1054 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 GNAQP50148 359 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 METAP2P50579 478 aaKnown RBP eCLIP14.05□□□□□ -0.16
APOC1-206ENST00000590334 NUP133Q8WUM0 1156 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 LZTS2Q9BRK4 669 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 LARP6Q9BRS8 491 aaKnown RBP14.05□□□□□ -0.16
APOC1-206ENST00000590334 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 GPCPD1Q9NPB8 672 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 FBXO28Q9NVF7 368 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 RBM28Q9NW13 759 aaKnown RBP14.05□□□□□ -0.16
APOC1-206ENST00000590334 HOXC10Q9NYD6 342 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 PPP1R9AQ9ULJ8 1098 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
APOC1-206ENST00000590334 MGAMO43451 1857 aa14.05□□□□□ -0.16
APOC1-206ENST00000590334 CCDC196A0A1B0GTZ2 297 aa14.04□□□□□ -0.16
APOC1-206ENST00000590334 GOLGA8AA7E2F4 631 aa14.04□□□□□ -0.16
APOC1-206ENST00000590334 PFKFB2O60825 505 aa14.04□□□□□ -0.16
APOC1-206ENST00000590334 FLOT1O75955 427 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms