RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ZSCAN31Q96LW9 406 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 NEK1Q96PY6 1258 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 ARMT1Q9H993 441 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 DAGLAQ9Y4D2 1042 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 PPP2R3BQ9Y5P8 575 aa8.63□□□□□ -1.03
SMAD4-210ENST00000590061 COL1A1P02452 1464 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-210ENST00000590061 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 DHX16O60231 1041 aaKnown RBP8.62□□□□□ -1.03
SMAD4-210ENST00000590061 PTH1RQ03431 593 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 CFAP100Q494V2 611 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 AKNAD1Q5T1N1 836 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 SYNE3Q6ZMZ3 975 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 RUFY3Q7L099 469 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 APOBEC3FQ8IUX4 373 aaKnown RBP8.62□□□□□ -1.03
SMAD4-210ENST00000590061 LCORLQ8N3X6 602 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 CERS5Q8N5B7 392 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 TMEM87BQ96K49 555 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 CCDC17Q96LX7 622 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 EHD4Q9H223 541 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 DCP1AQ9NPI6 582 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-210ENST00000590061 SH2B1Q9NRF2 756 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-210ENST00000590061 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 MCM9Q9NXL9 1143 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 RNF181Q9P0P0 153 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 PI4KBQ9UBF8 816 aa8.62□□□□□ -1.03
SMAD4-210ENST00000590061 COL2A1P02458 1487 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-210ENST00000590061 F8W031 263 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 ORC4O43929 436 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 ZIC2O95409 532 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 NEK4P51957 841 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 PPARAQ07869 468 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 C9orf131Q5VYM1 1079 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 APOBEC3HQ6NTF7 200 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 PNMA8AQ86V59 439 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 ZNF444Q8N0Y2 327 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 TGFBRAP1Q8WUH2 860 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 JAKMIP1Q96N16 626 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 SEC62Q99442 399 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 UBAC1Q9BSL1 405 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 MYOZ2Q9NPC6 264 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 ADARB2Q9NS39 739 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 HERC5Q9UII4 1024 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 CNOT7Q9UIV1 285 aaKnown RBP8.61□□□□□ -1.03
SMAD4-210ENST00000590061 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 KIF3AQ9Y496 699 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 GPSM3Q9Y4H4 160 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 SNX14Q9Y5W7 946 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
SMAD4-210ENST00000590061 PITPNM2Q9BZ72 1349 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 USP17L21D6R901 530 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 E7EWF7 191 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CYP21A2P08686 494 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 FGRP09769 529 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CALM1P0DP23 149 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CALM2P0DP24 149 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CALM3P0DP25 149 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 GMPSP49915 693 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-210ENST00000590061 SCNN1DP51172 638 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 RCAN1P53805 252 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 RHBDL3P58872 404 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 C12orf60Q5U649 245 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CDC42EP5Q6NZY7 148 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CPLX2Q6PUV4 134 aaKnown RBP8.6□□□□□ -1.03
SMAD4-210ENST00000590061 CCDC129Q6ZRS4 1044 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 USP50Q70EL3 339 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-210ENST00000590061 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-210ENST00000590061 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 SH3RF3Q8TEJ3 882 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-210ENST00000590061 FAM151AQ8WW52 585 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 TTC14Q96N46 770 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 PDRG1Q9NUG6 133 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 GPRC5DQ9NZD1 345 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 SERPINB13Q9UIV8 391 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 LIMCH1Q9UPQ0 1083 aa8.6□□□□□ -1.03
SMAD4-210ENST00000590061 FLT1P17948 1338 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 GLTPD2A6NH11 291 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 LIFRP42702 1097 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 RASSF7Q02833 373 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 SUPT20HL1Q3ZLR7 823 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 TMEM259Q4ZIN3 620 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 DCAF15Q66K64 600 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 CTR9Q6PD62 1173 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 ADGRA1Q86SQ6 560 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 ZSCAN29Q8IWY8 852 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 CRACR2BQ8N4Y2 399 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 ZNF384Q8TF68 577 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 IPO9Q96P70 1041 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms