RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ADAMTS5Q9UNA0 930 aa19.53■□□□□ 0.72
MBD3-206ENST00000589901 LAMA2P24043 3122 aaKnown RBP19.53■□□□□ 0.72
MBD3-206ENST00000589901 FCER1AP12319 257 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 RASA1P20936 1047 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 MDM2Q00987 491 aaPredicted RBP19.52■□□□□ 0.72
MBD3-206ENST00000589901 SBK1Q52WX2 424 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 FAM83BQ5T0W9 1011 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 GJC2Q5T442 439 aaPredicted RBP19.52■□□□□ 0.72
MBD3-206ENST00000589901 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 MAML3Q96JK9 1138 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 GOPCQ9HD26 462 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 SLC5A4Q9NY91 659 aa19.52■□□□□ 0.72
MBD3-206ENST00000589901 ZNF236Q9UL36 1845 aa19.51■□□□□ 0.71
MBD3-206ENST00000589901 MINDY4BA8MYZ0 360 aa19.51■□□□□ 0.71
MBD3-206ENST00000589901 VWA5AO00534 786 aa19.51■□□□□ 0.71
MBD3-206ENST00000589901 APPBP2Q92624 585 aa19.51■□□□□ 0.71
MBD3-206ENST00000589901 PPP1R9AQ9ULJ8 1098 aa19.51■□□□□ 0.71
MBD3-206ENST00000589901 RNF113AO15541 343 aaKnown RBP19.5■□□□□ 0.71
MBD3-206ENST00000589901 SEPT4O43236 478 aa19.5■□□□□ 0.71
MBD3-206ENST00000589901 SLC25A27O95847 323 aa19.5■□□□□ 0.71
MBD3-206ENST00000589901 LRIT3Q3SXY7 679 aa19.5■□□□□ 0.71
MBD3-206ENST00000589901 GIMAP6Q6P9H5 292 aa19.5■□□□□ 0.71
MBD3-206ENST00000589901 RIOX2Q8IUF8 465 aa19.5■□□□□ 0.71
MBD3-206ENST00000589901 NUP88Q99567 741 aaPredicted RBP19.5■□□□□ 0.71
MBD3-206ENST00000589901 MKNK2Q9HBH9 465 aa19.5■□□□□ 0.71
MBD3-206ENST00000589901 EPB41L4AQ9HCS5 686 aaPredicted RBP19.5■□□□□ 0.71
MBD3-206ENST00000589901 FRMPD3Q5JV73 1810 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 M0R2C6 588 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 GPAA1O43292 621 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 MYCNP04198 464 aaPredicted RBP19.49■□□□□ 0.71
MBD3-206ENST00000589901 PGK2P07205 417 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 STAT3P40763 770 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 ARRDC4Q8NCT1 418 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 REPS2Q8NFH8 660 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 MMP19Q99542 508 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 ZNF214Q9UL59 606 aaPredicted RBP19.49■□□□□ 0.71
MBD3-206ENST00000589901 A0A0C4DFX4 3053 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 MYH8P13535 1937 aa19.49■□□□□ 0.71
MBD3-206ENST00000589901 RTP1P59025 263 aa19.48■□□□□ 0.71
MBD3-206ENST00000589901 MYH7P12883 1935 aa19.48■□□□□ 0.71
MBD3-206ENST00000589901 ROBO3Q96MS0 1386 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 KBTBD13C9JR72 458 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 F5H6K3 240 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 PRDM1O75626 825 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 ZFYP08048 801 aaPredicted RBP19.47■□□□□ 0.71
MBD3-206ENST00000589901 TDO2P48775 406 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 KLRC3Q07444 240 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 KCTD2Q14681 263 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 FAM47AQ5JRC9 791 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 Q7L0L9 218 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
MBD3-206ENST00000589901 NYAP2Q9P242 653 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 ATP11BQ9Y2G3 1177 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 PCDHB15Q9Y5E8 787 aa19.47■□□□□ 0.71
MBD3-206ENST00000589901 NDUFB10O96000 172 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 APPP05067 770 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 ZNF792Q3KQV3 632 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 GPR153Q6NV75 609 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 SLC39A5Q6ZMH5 540 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 DEFB123Q8N688 67 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 SEC62Q99442 399 aaKnown RBP19.46■□□□□ 0.71
MBD3-206ENST00000589901 SLF1Q9BQI6 1058 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 CLIP2Q9UDT6 1046 aa19.46■□□□□ 0.71
MBD3-206ENST00000589901 IGKV6D-41A0A0C4DH26 115 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 PATL2C9JE40 543 aaKnown RBP19.45■□□□□ 0.7
MBD3-206ENST00000589901 TAL1P17542 331 aaPredicted RBP19.45■□□□□ 0.7
MBD3-206ENST00000589901 GNAT2P19087 354 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 ADCYAP1R1P41586 468 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 LRRC41Q15345 812 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 PI4K2BQ8TCG2 481 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 FERMT2Q96AC1 680 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 LBHD1Q9BQE6 289 aaPredicted RBP19.45■□□□□ 0.7
MBD3-206ENST00000589901 TINF2Q9BSI4 451 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 PARP14Q460N5 1801 aa19.45■□□□□ 0.7
MBD3-206ENST00000589901 SNRNP48Q6IEG0 339 aaKnown RBP19.44■□□□□ 0.7
MBD3-206ENST00000589901 IFNL3Q8IZI9 196 aa19.44■□□□□ 0.7
MBD3-206ENST00000589901 ZNF444Q8N0Y2 327 aaPredicted RBP19.44■□□□□ 0.7
MBD3-206ENST00000589901 TEX13BQ9BXU2 312 aa19.44■□□□□ 0.7
MBD3-206ENST00000589901 PRKAG2Q9UGJ0 569 aa19.44■□□□□ 0.7
MBD3-206ENST00000589901 DIS3Q9Y2L1 958 aaKnown RBP19.44■□□□□ 0.7
MBD3-206ENST00000589901 RIPK3Q9Y572 518 aa19.44■□□□□ 0.7
MBD3-206ENST00000589901 GREB1LQ9C091 1923 aaPredicted RBP19.44■□□□□ 0.7
MBD3-206ENST00000589901 TTC41PQ6P2S7 1318 aa19.44■□□□□ 0.7
MBD3-206ENST00000589901 COPB2P35606 906 aa19.43■□□□□ 0.7
MBD3-206ENST00000589901 TRIM60Q495X7 471 aa19.43■□□□□ 0.7
MBD3-206ENST00000589901 PRPF38AQ8NAV1 312 aaKnown RBP19.43■□□□□ 0.7
MBD3-206ENST00000589901 CEP95Q96GE4 821 aa19.43■□□□□ 0.7
MBD3-206ENST00000589901 XPNPEP3Q9NQH7 507 aa19.43■□□□□ 0.7
MBD3-206ENST00000589901 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
MBD3-206ENST00000589901 COL11A1P12107 1806 aaPredicted RBP19.42■□□□□ 0.7
MBD3-206ENST00000589901 ERC2O15083 957 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 ZNF865P0CJ78 1059 aaPredicted RBP19.42■□□□□ 0.7
MBD3-206ENST00000589901 RARBP10826 455 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 SNX17Q15036 470 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 CPXCR1Q8N123 301 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 LRRC47Q8N1G4 583 aaKnown RBP19.42■□□□□ 0.7
MBD3-206ENST00000589901 MKL1Q969V6 931 aa19.42■□□□□ 0.7
MBD3-206ENST00000589901 LENG1Q96BZ8 264 aaPredicted RBP19.42■□□□□ 0.7
MBD3-206ENST00000589901 FSD1Q9BTV5 496 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms