RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 STIM2Q9P246 746 aa13.14□□□□□ -0.31
TREM1-206ENST00000589882 EPN1Q9Y6I3 576 aaPredicted RBP13.14□□□□□ -0.31
TREM1-206ENST00000589882 RASSF10A6NK89 507 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 CYP21A2P08686 494 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
TREM1-206ENST00000589882 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
TREM1-206ENST00000589882 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
TREM1-206ENST00000589882 C2orf54Q08AI8 447 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 PAK2Q13177 524 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
TREM1-206ENST00000589882 SEPT2Q15019 361 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 PPP1R7Q15435 360 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 IFT20Q8IY31 132 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 CCT6BQ92526 530 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 NCOA5Q9HCD5 579 aaKnown RBP13.13□□□□□ -0.31
TREM1-206ENST00000589882 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.13□□□□□ -0.31
TREM1-206ENST00000589882 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
TREM1-206ENST00000589882 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
TREM1-206ENST00000589882 SPDYE3A6NKU9 549 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 B4DLN1 442 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 ENC1O14682 589 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 FDPSP14324 419 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 CCND1P24385 295 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 KIF5BP33176 963 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 DYNC1I2Q13409 638 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 IFI16Q16666 785 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 HIBCHQ6NVY1 386 aaPredicted RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 TRMT44Q8IYL2 757 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 MIPOL1Q8TD10 442 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 BICD1Q96G01 975 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 ZNF570Q96NI8 536 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 NUP88Q99567 741 aaPredicted RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 MMTAG2Q9BU76 263 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 ESF1Q9H501 851 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 OPLAHO14841 1288 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 PPIP5K2O43314 1243 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SMIM24O75264 130 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SASH1O94885 1247 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 ABL1P00519 1130 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 LINGO3P0C6S8 592 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 GNAT1P11488 350 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 PRLRP16471 622 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 ATP4AP20648 1035 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 CNGA1P29973 690 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SPAG1Q07617 926 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 CUL3Q13618 768 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 C1QTNF12Q5T7M4 302 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 CCDC129Q6ZRS4 1044 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 CCDC43Q96MW1 224 aaKnown RBP13.12□□□□□ -0.31
TREM1-206ENST00000589882 TSGA10Q9BZW7 698 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
TREM1-206ENST00000589882 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
TREM1-206ENST00000589882 PAEPP09466 180 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 ALADP13716 330 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 BIRC3Q13489 604 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
TREM1-206ENST00000589882 ANKS4BQ8N8V4 417 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.11□□□□□ -0.31
TREM1-206ENST00000589882 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
TREM1-206ENST00000589882 PPANQ9NQ55 473 aaKnown RBP13.11□□□□□ -0.31
TREM1-206ENST00000589882 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 CCT8L1PA6NM43 557 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 NPTXRO95502 500 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 KRT14P02533 472 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 PYGLP06737 847 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 IDEP14735 1019 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 ABCD1P33897 745 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms