RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 DOCK3Q8IZD9 2030 aa24.63■■□□□ 1.53
MBD3-205ENST00000589064 NDUFB10O96000 172 aa24.63■■□□□ 1.53
MBD3-205ENST00000589064 TFRCP02786 760 aaKnown RBP24.63■■□□□ 1.53
MBD3-205ENST00000589064 PAK6Q9NQU5 681 aaPredicted RBP24.63■■□□□ 1.53
MBD3-205ENST00000589064 CCDC171Q6TFL3 1326 aa24.62■■□□□ 1.53
MBD3-205ENST00000589064 TTLL1O95922 423 aa24.62■■□□□ 1.53
MBD3-205ENST00000589064 ZKSCAN1P17029 563 aaPredicted RBP24.62■■□□□ 1.53
MBD3-205ENST00000589064 ERCC3P19447 782 aa24.62■■□□□ 1.53
MBD3-205ENST00000589064 TRMT44Q8IYL2 757 aaKnown RBP24.62■■□□□ 1.53
MBD3-205ENST00000589064 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.62■■□□□ 1.533e-16■■■□□ 18.7
MBD3-205ENST00000589064 HMX1Q9NP08 348 aaPredicted RBP24.62■■□□□ 1.53
MBD3-205ENST00000589064 ADAMTS5Q9UNA0 930 aa24.62■■□□□ 1.53
MBD3-205ENST00000589064 RPTORQ8N122 1335 aa24.61■■□□□ 1.53
MBD3-205ENST00000589064 TMEM132BQ14DG7 1078 aa24.61■■□□□ 1.53
MBD3-205ENST00000589064 CWC27Q6UX04 472 aaKnown RBP24.61■■□□□ 1.53
MBD3-205ENST00000589064 SHCBP1Q8NEM2 672 aa24.61■■□□□ 1.53
MBD3-205ENST00000589064 APBA2Q99767 749 aa24.61■■□□□ 1.53
MBD3-205ENST00000589064 DIAPH3Q9NSV4 1193 aa24.61■■□□□ 1.53
MBD3-205ENST00000589064 PPP1R9AQ9ULJ8 1098 aa24.61■■□□□ 1.53
MBD3-205ENST00000589064 TSPY2A6NKD2 308 aa24.6■■□□□ 1.53
MBD3-205ENST00000589064 VWA5AO00534 786 aa24.6■■□□□ 1.53
MBD3-205ENST00000589064 GRB14Q14449 540 aa24.6■■□□□ 1.53
MBD3-205ENST00000589064 NCAPG2Q86XI2 1143 aa24.6■■□□□ 1.53
MBD3-205ENST00000589064 LRRC47Q8N1G4 583 aaKnown RBP24.6■■□□□ 1.53
MBD3-205ENST00000589064 RANBP6O60518 1105 aaKnown RBP24.59■■□□□ 1.53
MBD3-205ENST00000589064 PRKAR2AP13861 404 aaKnown RBP24.59■■□□□ 1.53
MBD3-205ENST00000589064 MFAP1P55081 439 aaKnown RBP24.59■■□□□ 1.53
MBD3-205ENST00000589064 STRNO43815 780 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 FGRP09769 529 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 CACNB2Q08289 660 aaPredicted RBP24.58■■□□□ 1.53
MBD3-205ENST00000589064 MAP3K21Q5TCX8 1036 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 PRPF38BQ5VTL8 546 aaKnown RBP24.58■■□□□ 1.53
MBD3-205ENST00000589064 NPLOC4Q8TAT6 608 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 SLF1Q9BQI6 1058 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 MROH8Q9H579 483 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 IL17RBQ9NRM6 502 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 TOMM22Q9NS69 142 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 FLRT1Q9NZU1 646 aa24.58■■□□□ 1.53
MBD3-205ENST00000589064 RBBP6Q7Z6E9 1792 aaKnown RBP24.58■■□□□ 1.52
MBD3-205ENST00000589064 PLIN4Q96Q06 1357 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 ORC4O43929 436 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 NMT2O60551 498 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 HAND2P61296 217 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 SLFN13Q68D06 897 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 DPP9Q86TI2 863 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 GMCL1P1Q8NEA9 526 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 CRISPLD2Q9H0B8 497 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 SYNPO2Q9UMS6 1093 aa24.58■■□□□ 1.52
MBD3-205ENST00000589064 BRCA2P51587 3418 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 MYH8P13535 1937 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 HIP1O00291 1037 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 HOXC6P09630 235 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 ADORA2AP29274 412 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 STAT3P40763 770 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 RRP12Q5JTH9 1297 aaKnown RBP24.57■■□□□ 1.52
MBD3-205ENST00000589064 UBE2Q1Q7Z7E8 422 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 CHMP4CQ96CF2 233 aa24.57■■□□□ 1.52
MBD3-205ENST00000589064 SLC25A27O95847 323 aa24.56■■□□□ 1.52
MBD3-205ENST00000589064 TTC22Q5TAA0 569 aa24.56■■□□□ 1.52
MBD3-205ENST00000589064 RIOX2Q8IUF8 465 aa24.56■■□□□ 1.52
MBD3-205ENST00000589064 PRPF38AQ8NAV1 312 aaKnown RBP24.56■■□□□ 1.52
MBD3-205ENST00000589064 REPS2Q8NFH8 660 aa24.56■■□□□ 1.52
MBD3-205ENST00000589064 STX8Q9UNK0 236 aa24.56■■□□□ 1.52
MBD3-205ENST00000589064 COBLO75128 1261 aa24.55■■□□□ 1.52
MBD3-205ENST00000589064 FARP2O94887 1054 aaPredicted RBP24.55■■□□□ 1.52
MBD3-205ENST00000589064 GSPT1P15170 499 aaKnown RBP24.55■■□□□ 1.52
MBD3-205ENST00000589064 MFSD14CQ5VZR4 134 aa24.55■■□□□ 1.52
MBD3-205ENST00000589064 KIFC2Q96AC6 838 aa24.55■■□□□ 1.52
MBD3-205ENST00000589064 FEM1BQ9UK73 627 aa24.55■■□□□ 1.52
MBD3-205ENST00000589064 ZNF214Q9UL59 606 aaPredicted RBP24.55■■□□□ 1.52
MBD3-205ENST00000589064 PLXNB2O15031 1838 aa24.55■■□□□ 1.52
MBD3-205ENST00000589064 ZMYM6O95789 1325 aa24.55■■□□□ 1.52
MBD3-205ENST00000589064 BMP3P12645 472 aa24.54■■□□□ 1.52
MBD3-205ENST00000589064 CAPN2P17655 700 aa24.54■■□□□ 1.52
MBD3-205ENST00000589064 CCND3P30281 292 aaPredicted RBP24.54■■□□□ 1.52
MBD3-205ENST00000589064 PPP4R3BQ5MIZ7 849 aa24.54■■□□□ 1.52
MBD3-205ENST00000589064 PDE4DIPQ5VU43 2346 aa24.54■■□□□ 1.52
MBD3-205ENST00000589064 GREB1LQ9C091 1923 aaPredicted RBP24.54■■□□□ 1.52
MBD3-205ENST00000589064 FCER1AP12319 257 aa24.53■■□□□ 1.52
MBD3-205ENST00000589064 MCCP23508 829 aa24.53■■□□□ 1.52
MBD3-205ENST00000589064 ABRAQ8N0Z2 381 aa24.53■■□□□ 1.52
MBD3-205ENST00000589064 NBPF3Q9H094 633 aa24.53■■□□□ 1.52
MBD3-205ENST00000589064 ISY1Q9ULR0 285 aaKnown RBP24.53■■□□□ 1.52
MBD3-205ENST00000589064 RLFQ13129 1914 aa24.53■■□□□ 1.52
MBD3-205ENST00000589064 TMEM232C9JQI7 657 aa24.52■■□□□ 1.52
MBD3-205ENST00000589064 ZBED4O75132 1171 aa24.52■■□□□ 1.52
MBD3-205ENST00000589064 CYP2C19P33261 490 aa24.52■■□□□ 1.52
MBD3-205ENST00000589064 MFSD6Q6ZSS7 791 aa24.52■■□□□ 1.52
MBD3-205ENST00000589064 DPF3Q92784 378 aa24.52■■□□□ 1.52
MBD3-205ENST00000589064 CTDP1Q9Y5B0 961 aaPredicted RBP24.52■■□□□ 1.52
MBD3-205ENST00000589064 MKI67P46013 3256 aaKnown RBP24.52■■□□□ 1.52
MBD3-205ENST00000589064 ZNF213O14771 459 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 SLC4A3P48751 1232 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 AKNAD1Q5T1N1 836 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 TBC1D10CQ8IV04 446 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 CPXCR1Q8N123 301 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 MMP19Q99542 508 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 SLC1A4P43007 532 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 STAG1Q8WVM7 1258 aa24.51■■□□□ 1.51
MBD3-205ENST00000589064 GMCL1Q96IK5 515 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms