RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ADAM19Q9H013 955 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 CCDC113Q9H0I3 377 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 ACTR10Q9NZ32 417 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 ZNRF3Q9ULT6 936 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 GPR25O00155 361 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 GFRA3O60609 400 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 CLCQ05315 142 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 DDR2Q16832 855 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 GK5Q6ZS86 529 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 MICALL1Q8N3F8 863 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 OR6P1Q8NGX9 317 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 TRERF1Q96PN7 1200 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 NAGPAQ9UK23 515 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 SLC6A14Q9UN76 642 aa10.19□□□□□ -0.78
ATG4D-210ENST00000588972 C2CD2LO14523 706 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 BPNT1O95861 308 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 ESRRAP11474 423 aaPredicted RBP10.18□□□□□ -0.78
ATG4D-210ENST00000588972 HSPA6P17066 643 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 ZNF252P-AS1Q0IIN9 211 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 PERM1Q5SV97 790 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 COL23A1Q86Y22 540 aaPredicted RBP10.18□□□□□ -0.78
ATG4D-210ENST00000588972 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 EMILIN2Q9BXX0 1053 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 CBX8Q9HC52 389 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 TRIM33Q9UPN9 1127 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 CD2APQ9Y5K6 639 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 ANKRD26Q9UPS8 1709 aa10.18□□□□□ -0.78
ATG4D-210ENST00000588972 RTL1A6NKG5 1358 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 RGPD2P0DJD1 1756 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 WASHC2AQ641Q2 1341 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 IMPDH2P12268 514 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 PCBP4P57723 403 aaKnown RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 PTPN11Q06124 597 aaPredicted RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 PTPROQ16827 1216 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 DIEXFQ68CQ4 756 aaKnown RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 LSRQ86X29 649 aaPredicted RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 RBBP8NLQ8NC74 664 aaPredicted RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 LACRTQ9GZZ8 138 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 SMG9Q9H0W8 520 aaKnown RBP10.17□□□□□ -0.78
ATG4D-210ENST00000588972 ST7Q9NRC1 585 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
ATG4D-210ENST00000588972 CGNL1Q0VF96 1302 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 HMGB2P26583 209 aaKnown RBP10.16□□□□□ -0.78
ATG4D-210ENST00000588972 PLEKHG4Q58EX7 1191 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 PDZD3Q86UT5 571 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 LILRB2Q8N423 598 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 KIFC2Q96AC6 838 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 DNAJC7Q99615 494 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 PANK3Q9H999 370 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 EHMT1Q9H9B1 1298 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 KANSL2Q9H9L4 492 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 SENP2Q9HC62 589 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 SH2B1Q9NRF2 756 aaPredicted RBP10.16□□□□□ -0.78
ATG4D-210ENST00000588972 POLR3KQ9Y2Y1 108 aaPredicted RBP10.16□□□□□ -0.78
ATG4D-210ENST00000588972 TOGARAM1Q9Y4F4 1720 aa10.16□□□□□ -0.78
ATG4D-210ENST00000588972 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
ATG4D-210ENST00000588972 MAP3K19Q56UN5 1328 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 FYB1O15117 783 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 BMP4P12644 408 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 HOXC9P31274 260 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 RPL6Q02878 288 aaKnown RBP10.15□□□□□ -0.78
ATG4D-210ENST00000588972 SCARA3Q6AZY7 606 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 ELMSAN1Q6PJG2 1045 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 FLAD1Q8NFF5 587 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 SH3TC2Q8TF17 1288 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 KCNB2Q92953 911 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 LPIN3Q9BQK8 851 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 TNKS2Q9H2K2 1166 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 AVENQ9NQS1 362 aaPredicted RBP10.15□□□□□ -0.78
ATG4D-210ENST00000588972 MAPK8IP1Q9UQF2 711 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 PCDHB14Q9Y5E9 798 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 C4BP0C0L5 1744 aa10.15□□□□□ -0.78
ATG4D-210ENST00000588972 CICQ96RK0 1608 aaPredicted RBP10.15□□□□□ -0.79
ATG4D-210ENST00000588972 CDC14CA4D256 554 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 FBLN1P23142 703 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 AMPHP49418 695 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 CHMP4BP1P59074 171 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 IKBKEQ14164 716 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 RNF187Q5TA31 235 aaPredicted RBP10.14□□□□□ -0.79
ATG4D-210ENST00000588972 ZNF526Q8TF50 670 aaPredicted RBP10.14□□□□□ -0.79
ATG4D-210ENST00000588972 COG3Q96JB2 828 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 TRIM47Q96LD4 638 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 KLF15Q9UIH9 416 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 UBR3Q6ZT12 1888 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
ATG4D-210ENST00000588972 PDPK1O15530 556 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 ATE1O95260 518 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 ADH7P40394 386 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 CASP7P55210 303 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 RASGRF1Q13972 1273 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 LARP1BQ659C4 914 aaKnown RBP10.13□□□□□ -0.79
ATG4D-210ENST00000588972 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.13□□□□□ -0.79
ATG4D-210ENST00000588972 VWA5B2Q8N398 1253 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 MICAL1Q8TDZ2 1067 aa10.13□□□□□ -0.79
ATG4D-210ENST00000588972 PCNTO95613 3336 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms