RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LPAR1Q92633 364 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 NUP88Q99567 741 aaPredicted RBP13.75□□□□□ -0.21
RFX1-204ENST00000588885 GOPCQ9HD26 462 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 MYH7P12883 1935 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 A0A0D9SFI3 127 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
RFX1-204ENST00000588885 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
RFX1-204ENST00000588885 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
RFX1-204ENST00000588885 PDE4AP27815 886 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 RGS2P41220 211 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 TFAP4Q01664 338 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 PDE4BQ07343 736 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
RFX1-204ENST00000588885 SOCS4Q8WXH5 440 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 USP6NLQ92738 828 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 HTATIP2Q9BUP3 242 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 MOV10L1Q9BXT6 1211 aaKnown RBP13.74□□□□□ -0.21
RFX1-204ENST00000588885 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.74□□□□□ -0.212e-7■■■■□ 23.4
RFX1-204ENST00000588885 ZNF287Q9HBT7 754 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
RFX1-204ENST00000588885 TSPY3P0CV98 308 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 TSPY8P0CW00 308 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 ERCC3P19447 782 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 PTPREP23469 700 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 MAP2K5Q13163 448 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 MCMDC2Q4G0Z9 681 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 HABP4Q5JVS0 413 aaKnown RBP13.73□□□□□ -0.21
RFX1-204ENST00000588885 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 SPATC1LQ9H0A9 340 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 HMX1Q9NP08 348 aaPredicted RBP13.73□□□□□ -0.21
RFX1-204ENST00000588885 PAK6Q9NQU5 681 aaPredicted RBP13.73□□□□□ -0.21
RFX1-204ENST00000588885 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 IVNS1ABPQ9Y6Y0 642 aa13.73□□□□□ -0.21
RFX1-204ENST00000588885 ROBO3Q96MS0 1386 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 F5H6K3 240 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
RFX1-204ENST00000588885 NDUFB10O96000 172 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 XRCC5P13010 732 aaKnown RBP13.72□□□□□ -0.21
RFX1-204ENST00000588885 SLC4A3P48751 1232 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 KLRC3Q07444 240 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
RFX1-204ENST00000588885 TMEM132BQ14DG7 1078 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
RFX1-204ENST00000588885 LRRC47Q8N1G4 583 aaKnown RBP13.72□□□□□ -0.21
RFX1-204ENST00000588885 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 FLRT1Q9NZU1 646 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
RFX1-204ENST00000588885 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
RFX1-204ENST00000588885 RPTORQ8N122 1335 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
RFX1-204ENST00000588885 SDSP20132 328 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 CCND3P30281 292 aaPredicted RBP13.71□□□□□ -0.21
RFX1-204ENST00000588885 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 MB21D1Q8N884 522 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 NPLOC4Q8TAT6 608 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 APBA2Q99767 749 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
RFX1-204ENST00000588885 H0YGN5 161 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 VWA5AO00534 786 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 NMT2O60551 498 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 TTLL1O95922 423 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 FGAP02671 866 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 ADORA2AP29274 412 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 HAND2P61296 217 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 GRB14Q14449 540 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
RFX1-204ENST00000588885 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
RFX1-204ENST00000588885 DIS3LQ8TF46 1054 aaKnown RBP13.7□□□□□ -0.22
RFX1-204ENST00000588885 PPP1R9AQ9ULJ8 1098 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
RFX1-204ENST00000588885 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 COBLO75128 1261 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 HSPD1P10809 573 aaKnown RBP13.69□□□□□ -0.22
RFX1-204ENST00000588885 CYP2C19P33261 490 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 STAT3P40763 770 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 ALX1Q15699 326 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 CWC27Q6UX04 472 aaKnown RBP13.69□□□□□ -0.22
RFX1-204ENST00000588885 UBE2Q1Q7Z7E8 422 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 MKL1Q969V6 931 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 PAWRQ96IZ0 340 aaKnown RBP13.69□□□□□ -0.22
RFX1-204ENST00000588885 SLF1Q9BQI6 1058 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 ADAMTS5Q9UNA0 930 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
RFX1-204ENST00000588885 NR2E3Q9Y5X4 410 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
RFX1-204ENST00000588885 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 STRNO43815 780 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms