RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 KIAA1683Q9H0B3 1180 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 VCPKMTQ9H867 229 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 MAD2L2Q9UI95 211 aa26.33■■□□□ 1.81
ACTN4-210ENST00000588618 PLEKHA8P1O95397 391 aa26.32■■□□□ 1.8
ACTN4-210ENST00000588618 FSTL1Q12841 308 aa26.32■■□□□ 1.8
ACTN4-210ENST00000588618 ASPRV1Q53RT3 343 aa26.32■■□□□ 1.8
ACTN4-210ENST00000588618 SPDYE5A6NIY4 337 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 NDUFB10O96000 172 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 GOLGA8HP0CJ92 632 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 BACE1P56817 501 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 SLC35G1Q2M3R5 365 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 GPATCH4Q5T3I0 446 aaKnown RBP26.31■■□□□ 1.8
ACTN4-210ENST00000588618 SPICE1Q8N0Z3 855 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 SMARCC2Q8TAQ2 1214 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 CNKSR2Q8WXI2 1034 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 PALM3A6NDB9 673 aaPredicted RBP26.31■■□□□ 1.8
ACTN4-210ENST00000588618 FUT2Q10981 343 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 NBPF11Q86T75 865 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 LPAR1Q92633 364 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 OPTNQ96CV9 577 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 GMCL1Q96IK5 515 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 AFG3L2Q9Y4W6 797 aa26.31■■□□□ 1.8
ACTN4-210ENST00000588618 C19orf81C9J6K1 198 aa26.3■■□□□ 1.8
ACTN4-210ENST00000588618 HUNKP57058 714 aa26.3■■□□□ 1.8
ACTN4-210ENST00000588618 DGKZQ13574 1117 aa26.3■■□□□ 1.8
ACTN4-210ENST00000588618 TMTC3Q6ZXV5 915 aa26.3■■□□□ 1.8
ACTN4-210ENST00000588618 LLPHQ9BRT6 129 aaKnown RBP26.3■■□□□ 1.8
ACTN4-210ENST00000588618 FRMPD2Q68DX3 1309 aaPredicted RBP26.29■■□□□ 1.8
ACTN4-210ENST00000588618 PTPDC1A2A3K4 754 aa26.29■■□□□ 1.8
ACTN4-210ENST00000588618 SRBD1Q8N5C6 995 aaKnown RBP26.29■■□□□ 1.8
ACTN4-210ENST00000588618 PHKBQ93100 1093 aa26.29■■□□□ 1.8
ACTN4-210ENST00000588618 LZTS2Q9BRK4 669 aa26.29■■□□□ 1.8
ACTN4-210ENST00000588618 CPVLQ9H3G5 476 aa26.29■■□□□ 1.8
ACTN4-210ENST00000588618 TMOD4Q9NZQ9 345 aa26.29■■□□□ 1.8
ACTN4-210ENST00000588618 SMC3Q9UQE7 1217 aa26.29■■□□□ 1.8
ACTN4-210ENST00000588618 BMP3P12645 472 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 FDPSP14324 419 aaKnown RBP26.28■■□□□ 1.8
ACTN4-210ENST00000588618 DDIT3P35638 169 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 ZNF543Q08ER8 600 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 PPIL2Q13356 520 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 KCTD1Q719H9 257 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 CCDC82Q8N4S0 544 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 NUP88Q99567 741 aaPredicted RBP26.28■■□□□ 1.8
ACTN4-210ENST00000588618 KLRF2D3W0D1 207 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 IKQ13123 557 aaPredicted RBP26.28■■□□□ 1.8
ACTN4-210ENST00000588618 TRIM22Q8IYM9 498 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 DDX11Q96FC9 970 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 GPCPD1Q9NPB8 672 aa26.28■■□□□ 1.8
ACTN4-210ENST00000588618 IRF6O14896 467 aa26.27■■□□□ 1.8
ACTN4-210ENST00000588618 IFNAR1P17181 557 aa26.27■■□□□ 1.8
ACTN4-210ENST00000588618 GJB2P29033 226 aa26.27■■□□□ 1.8
ACTN4-210ENST00000588618 HMGCS2P54868 508 aa26.27■■□□□ 1.8
ACTN4-210ENST00000588618 AKAP17AQ02040 695 aaKnown RBP26.27■■□□□ 1.8
ACTN4-210ENST00000588618 CNTNAP5Q8WYK1 1306 aa26.27■■□□□ 1.8
ACTN4-210ENST00000588618 HMGN5P82970 282 aaKnown RBP26.26■■□□□ 1.79
ACTN4-210ENST00000588618 WDR46O15213 610 aaKnown RBP26.25■■□□□ 1.79
ACTN4-210ENST00000588618 CYTH3O43739 400 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 TTBK2Q6IQ55 1244 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 ABT1Q9ULW3 272 aaKnown RBP26.25■■□□□ 1.79
ACTN4-210ENST00000588618 KIF3AQ9Y496 699 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 TMEM88BA6NKF7 163 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 CXCL11O14625 94 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 SSRP1Q08945 709 aaKnown RBP26.25■■□□□ 1.79
ACTN4-210ENST00000588618 FAM83BQ5T0W9 1011 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 FAM184AQ8NB25 1140 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 EMILIN3Q9NT22 766 aa26.25■■□□□ 1.79
ACTN4-210ENST00000588618 SAPCD2Q86UD0 394 aa26.24■■□□□ 1.79
ACTN4-210ENST00000588618 SLC26A6Q9BXS9 759 aa26.24■■□□□ 1.79
ACTN4-210ENST00000588618 PARP14Q460N5 1801 aa26.23■■□□□ 1.79
ACTN4-210ENST00000588618 TMEM232C9JQI7 657 aa26.23■■□□□ 1.79
ACTN4-210ENST00000588618 VCAM1P19320 739 aa26.23■■□□□ 1.79
ACTN4-210ENST00000588618 STAT2P52630 851 aa26.23■■□□□ 1.79
ACTN4-210ENST00000588618 TANGO6Q9C0B7 1094 aa26.23■■□□□ 1.79
ACTN4-210ENST00000588618 UBA5Q9GZZ9 404 aa26.23■■□□□ 1.79
ACTN4-210ENST00000588618 hCG_1642624A0A1W2PR95 340 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 FMNL1O95466 1100 aaPredicted RBP26.22■■□□□ 1.79
ACTN4-210ENST00000588618 ZNF157P51786 506 aaPredicted RBP26.22■■□□□ 1.79
ACTN4-210ENST00000588618 SNAPC2Q13487 334 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 SH3D19Q5HYK7 790 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 WNK4Q96J92 1243 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 C12orf42Q96LP6 360 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 CWC22Q9HCG8 908 aaKnown RBP26.22■■□□□ 1.79
ACTN4-210ENST00000588618 RBM27Q9P2N5 1060 aaKnown RBP26.22■■□□□ 1.79
ACTN4-210ENST00000588618 ORC3Q9UBD5 711 aaPredicted RBP26.22■■□□□ 1.79
ACTN4-210ENST00000588618 KCNH4Q9UQ05 1017 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 SMARCA1P28370 1054 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 GJA5P36382 358 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 CHURC1Q8WUH1 139 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 AIFM3Q96NN9 605 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 SPZ1Q9BXG8 430 aa26.22■■□□□ 1.79
ACTN4-210ENST00000588618 RNF26Q9BY78 433 aaPredicted RBP26.22■■□□□ 1.79
ACTN4-210ENST00000588618 LOC285556D6RIA3 1793 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 A0A0G2JLL6 359 aaPredicted RBP26.21■■□□□ 1.79
ACTN4-210ENST00000588618 SLC16A2P36021 539 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 PKP1Q13835 747 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 GADL1Q6ZQY3 521 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 PRRT2Q7Z6L0 340 aaPredicted RBP26.21■■□□□ 1.79
ACTN4-210ENST00000588618 RPAP3Q9H6T3 665 aaPredicted RBP26.21■■□□□ 1.79
ACTN4-210ENST00000588618 VAT1LQ9HCJ6 419 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 FEM1BQ9UK73 627 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms