RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 MYPNQ86TC9 1320 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 ERVK-9P63128 1117 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 ERVK-24P63145 666 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 TRDNQ13061 729 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 RASGRP2Q7LDG7 609 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 IQCA1Q86XH1 822 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 DGKHQ86XP1 1220 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 ANKS1AQ92625 1134 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 ATG4CQ96DT6 458 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 GMCL1Q96IK5 515 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 ZSCAN10Q96SZ4 725 aaPredicted RBP23.79■■□□□ 1.4
DDX39A-207ENST00000588542 PAGR1Q9BTK6 254 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 BTBD7Q9P203 1132 aa23.79■■□□□ 1.4
DDX39A-207ENST00000588542 CCDC178Q5BJE1 867 aa23.78■■□□□ 1.4
DDX39A-207ENST00000588542 ENAHQ8N8S7 591 aaPredicted RBP23.78■■□□□ 1.4
DDX39A-207ENST00000588542 GPRC5AQ8NFJ5 357 aa23.78■■□□□ 1.4
DDX39A-207ENST00000588542 NCOA7Q8NI08 942 aa23.78■■□□□ 1.4
DDX39A-207ENST00000588542 ADAMTS5Q9UNA0 930 aa23.78■■□□□ 1.4
DDX39A-207ENST00000588542 TNKSO95271 1327 aa23.78■■□□□ 1.4
DDX39A-207ENST00000588542 BMP3P12645 472 aa23.77■■□□□ 1.4
DDX39A-207ENST00000588542 MCCP23508 829 aa23.77■■□□□ 1.4
DDX39A-207ENST00000588542 COL9A3Q14050 684 aaPredicted RBP23.77■■□□□ 1.4
DDX39A-207ENST00000588542 ARHGEF6Q15052 776 aa23.77■■□□□ 1.4
DDX39A-207ENST00000588542 MB21D2Q8IYB1 491 aaPredicted RBP23.77■■□□□ 1.4
DDX39A-207ENST00000588542 TNS4Q8IZW8 715 aa23.77■■□□□ 1.4
DDX39A-207ENST00000588542 CHMP4CQ96CF2 233 aa23.77■■□□□ 1.4
DDX39A-207ENST00000588542 PPP1R9AQ9ULJ8 1098 aa23.77■■□□□ 1.4
DDX39A-207ENST00000588542 FMNL1O95466 1100 aaPredicted RBP23.76■■□□□ 1.39
DDX39A-207ENST00000588542 SEC23AQ15436 765 aa23.76■■□□□ 1.39
DDX39A-207ENST00000588542 PKN2Q16513 984 aaKnown RBP23.76■■□□□ 1.39
DDX39A-207ENST00000588542 RALYLQ86SE5 291 aaKnown RBP23.76■■□□□ 1.39
DDX39A-207ENST00000588542 GNRH1P01148 92 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 SLC1A4P43007 532 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 FCGRTP55899 365 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 ANTXR2P58335 489 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 SAMD1Q6SPF0 538 aaPredicted RBP23.75■■□□□ 1.39
DDX39A-207ENST00000588542 RASEFQ8IZ41 740 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 SLF1Q9BQI6 1058 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 UBAC1Q9BSL1 405 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 PORCNQ9H237 461 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 FEM1BQ9UK73 627 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 MTMR7Q9Y216 660 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 PTPN22Q9Y2R2 807 aa23.75■■□□□ 1.39
DDX39A-207ENST00000588542 CENPFP49454 3210 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 REC8O95072 547 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 FBXO46Q6PJ61 603 aaPredicted RBP23.74■■□□□ 1.39
DDX39A-207ENST00000588542 KCTD1Q719H9 257 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 CHST3Q7LGC8 479 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 MB21D1Q8N884 522 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 REPS2Q8NFH8 660 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 DCAF4Q8WV16 495 aa23.74■■□□□ 1.39
DDX39A-207ENST00000588542 TMEM232C9JQI7 657 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 VWA5AO00534 786 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 SNHG28P0DPA3 235 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 PDHBP11177 359 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 TSGA10IPQ3SY00 556 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 RNF20Q5VTR2 975 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 PRPF38AQ8NAV1 312 aaKnown RBP23.73■■□□□ 1.39
DDX39A-207ENST00000588542 PNMA1Q8ND90 353 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 KCNB2Q92953 911 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 SRRDQ9UH36 339 aa23.73■■□□□ 1.39
DDX39A-207ENST00000588542 ZNFX1Q9P2E3 1918 aaKnown RBP23.72■■□□□ 1.39
DDX39A-207ENST00000588542 TNPO2O14787 897 aaKnown RBP23.72■■□□□ 1.39
DDX39A-207ENST00000588542 PLA2G6O60733 806 aa23.72■■□□□ 1.39
DDX39A-207ENST00000588542 TMEM132BQ14DG7 1078 aa23.72■■□□□ 1.39
DDX39A-207ENST00000588542 SPATC1LQ9H0A9 340 aa23.72■■□□□ 1.39
DDX39A-207ENST00000588542 KAT14Q9H8E8 782 aa23.72■■□□□ 1.39
DDX39A-207ENST00000588542 GABRQQ9UN88 632 aa23.72■■□□□ 1.39
DDX39A-207ENST00000588542 HSPA4P34932 840 aa23.71■■□□□ 1.39
DDX39A-207ENST00000588542 STAT2P52630 851 aa23.71■■□□□ 1.39
DDX39A-207ENST00000588542 IFIT1BQ5T764 474 aaKnown RBP23.71■■□□□ 1.39
DDX39A-207ENST00000588542 IGDCC4Q8TDY8 1250 aa23.71■■□□□ 1.39
DDX39A-207ENST00000588542 KIFC2Q96AC6 838 aa23.71■■□□□ 1.39
DDX39A-207ENST00000588542 MOV10L1Q9BXT6 1211 aaKnown RBP23.71■■□□□ 1.39
DDX39A-207ENST00000588542 SENP2Q9HC62 589 aa23.71■■□□□ 1.39
DDX39A-207ENST00000588542 IFIT3O14879 490 aaKnown RBP23.7■■□□□ 1.38
DDX39A-207ENST00000588542 EPB41L2O43491 1005 aaKnown RBP23.7■■□□□ 1.38
DDX39A-207ENST00000588542 HOXD10P28358 340 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 MAPK4P31152 587 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 PRMT2P55345 433 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 CCNA1P78396 465 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 PRKCZQ05513 592 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 CCDC96Q2M329 555 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 ADCK5Q3MIX3 580 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 TTBK2Q6IQ55 1244 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 FAM160B2Q86V87 743 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 CHURC1Q8WUH1 139 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 USP26Q9BXU7 913 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 GJD2Q9UKL4 321 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 ZNF214Q9UL59 606 aaPredicted RBP23.7■■□□□ 1.38
DDX39A-207ENST00000588542 ISY1Q9ULR0 285 aaKnown RBP23.7■■□□□ 1.38
DDX39A-207ENST00000588542 PTCH2Q9Y6C5 1203 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 SMCHD1A6NHR9 2005 aa23.7■■□□□ 1.38
DDX39A-207ENST00000588542 FRMPD2Q68DX3 1309 aaPredicted RBP23.69■■□□□ 1.38
DDX39A-207ENST00000588542 PRC1O43663 620 aa23.69■■□□□ 1.38
DDX39A-207ENST00000588542 ZNF543Q08ER8 600 aa23.69■■□□□ 1.38
DDX39A-207ENST00000588542 BTNL9Q6UXG8 535 aa23.69■■□□□ 1.38
DDX39A-207ENST00000588542 COA7Q96BR5 231 aa23.69■■□□□ 1.38
DDX39A-207ENST00000588542 SLC38A10Q9HBR0 1119 aa23.69■■□□□ 1.38
DDX39A-207ENST00000588542 HPS5Q9UPZ3 1129 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms