RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ERCC3P19447 782 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 PPP4R3BQ5MIZ7 849 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 NCAPG2Q86XI2 1143 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 MROH8Q9H579 483 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 DIAPH3Q9NSV4 1193 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 FBXO28Q9NVF7 368 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 PPP1R9AQ9ULJ8 1098 aa23.21■■□□□ 1.31
TPM4-208ENST00000588410 RBBP6Q7Z6E9 1792 aaKnown RBP23.2■■□□□ 1.3
TPM4-208ENST00000588410 CCDC171Q6TFL3 1326 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 TSPY2A6NKD2 308 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 STRNO43815 780 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 FARP2O94887 1054 aaPredicted RBP23.2■■□□□ 1.3
TPM4-208ENST00000588410 GRB14Q14449 540 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 CCL14Q16627 93 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 MKL1Q969V6 931 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 NUP88Q99567 741 aaPredicted RBP23.2■■□□□ 1.3
TPM4-208ENST00000588410 TOMM22Q9NS69 142 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 ANAPC4Q9UJX5 808 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 SYNPO2Q9UMS6 1093 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 CENPFP49454 3210 aa23.2■■□□□ 1.3
TPM4-208ENST00000588410 PLIN4Q96Q06 1357 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 KIAA0100Q14667 2235 aaKnown RBP23.19■■□□□ 1.3
TPM4-208ENST00000588410 HIP1O00291 1037 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 SLC25A27O95847 323 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 FGAP02671 866 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 HSPD1P10809 573 aaKnown RBP23.19■■□□□ 1.3
TPM4-208ENST00000588410 MFSD14CQ5VZR4 134 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 DPP9Q86TI2 863 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 ZNF589Q86UQ0 364 aaPredicted RBP23.19■■□□□ 1.3
TPM4-208ENST00000588410 SLF1Q9BQI6 1058 aa23.19■■□□□ 1.3
TPM4-208ENST00000588410 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.19■■□□□ 1.32e-6■■■■■ 36.1
TPM4-208ENST00000588410 CTDP1Q9Y5B0 961 aaPredicted RBP23.19■■□□□ 1.3
TPM4-208ENST00000588410 VWA5AO00534 786 aa23.18■■□□□ 1.3
TPM4-208ENST00000588410 RANBP6O60518 1105 aaKnown RBP23.18■■□□□ 1.3
TPM4-208ENST00000588410 TMEM132BQ14DG7 1078 aa23.18■■□□□ 1.3
TPM4-208ENST00000588410 LRRC47Q8N1G4 583 aaKnown RBP23.18■■□□□ 1.3
TPM4-208ENST00000588410 HTATIP2Q9BUP3 242 aa23.18■■□□□ 1.3
TPM4-208ENST00000588410 SLC5A4Q9NY91 659 aa23.18■■□□□ 1.3
TPM4-208ENST00000588410 ISY1Q9ULR0 285 aaKnown RBP23.18■■□□□ 1.3
TPM4-208ENST00000588410 ADAMTS5Q9UNA0 930 aa23.18■■□□□ 1.3
TPM4-208ENST00000588410 HOXC6P09630 235 aa23.17■■□□□ 1.3
TPM4-208ENST00000588410 ADORA2AP29274 412 aa23.17■■□□□ 1.3
TPM4-208ENST00000588410 CACNB2Q08289 660 aaPredicted RBP23.17■■□□□ 1.3
TPM4-208ENST00000588410 MAP3K21Q5TCX8 1036 aa23.17■■□□□ 1.3
TPM4-208ENST00000588410 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
TPM4-208ENST00000588410 GMCL1P1Q8NEA9 526 aa23.17■■□□□ 1.3
TPM4-208ENST00000588410 CRISPLD2Q9H0B8 497 aa23.17■■□□□ 1.3
TPM4-208ENST00000588410 INCENPQ9NQS7 918 aa23.17■■□□□ 1.3
TPM4-208ENST00000588410 STAT3P40763 770 aa23.16■■□□□ 1.3
TPM4-208ENST00000588410 SLFN13Q68D06 897 aa23.16■■□□□ 1.3
TPM4-208ENST00000588410 PRPF38AQ8NAV1 312 aaKnown RBP23.16■■□□□ 1.3
TPM4-208ENST00000588410 DPF3Q92784 378 aa23.16■■□□□ 1.3
TPM4-208ENST00000588410 STX8Q9UNK0 236 aa23.16■■□□□ 1.3
TPM4-208ENST00000588410 ZMYM6O95789 1325 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 ORC4O43929 436 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 ZBED4O75132 1171 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 FCER1AP12319 257 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 COPB2P35606 906 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 RRP12Q5JTH9 1297 aaKnown RBP23.15■■□□□ 1.3
TPM4-208ENST00000588410 UBE2Q1Q7Z7E8 422 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 RIOX2Q8IUF8 465 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 ABRAQ8N0Z2 381 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 NPLOC4Q8TAT6 608 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 FEM1BQ9UK73 627 aa23.15■■□□□ 1.3
TPM4-208ENST00000588410 SLC34A2O95436 690 aa23.14■■□□□ 1.29
TPM4-208ENST00000588410 BMP3P12645 472 aa23.14■■□□□ 1.29
TPM4-208ENST00000588410 KIFC2Q96AC6 838 aa23.14■■□□□ 1.29
TPM4-208ENST00000588410 FLRT1Q9NZU1 646 aa23.14■■□□□ 1.29
TPM4-208ENST00000588410 TNRC18O15417 2968 aaPredicted RBP23.13■■□□□ 1.29
TPM4-208ENST00000588410 PDE4AP27815 886 aa23.13■■□□□ 1.29
TPM4-208ENST00000588410 HAND2P61296 217 aa23.13■■□□□ 1.29
TPM4-208ENST00000588410 ANKLE1Q8NAG6 615 aa23.13■■□□□ 1.29
TPM4-208ENST00000588410 MMP19Q99542 508 aa23.13■■□□□ 1.29
TPM4-208ENST00000588410 MYH8P13535 1937 aa23.13■■□□□ 1.29
TPM4-208ENST00000588410 FGRP09769 529 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 CCND3P30281 292 aaPredicted RBP23.12■■□□□ 1.29
TPM4-208ENST00000588410 SLC1A4P43007 532 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 IKQ13123 557 aaPredicted RBP23.12■■□□□ 1.29
TPM4-208ENST00000588410 KCTD2Q14681 263 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 MFSD6Q6ZSS7 791 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 REPS2Q8NFH8 660 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 TEX13BQ9BXU2 312 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 RNF41Q9H4P4 317 aaPredicted RBP23.12■■□□□ 1.29
TPM4-208ENST00000588410 IL17RBQ9NRM6 502 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 ZNF214Q9UL59 606 aaPredicted RBP23.12■■□□□ 1.29
TPM4-208ENST00000588410 TACC3Q9Y6A5 838 aa23.12■■□□□ 1.29
TPM4-208ENST00000588410 TMEM232C9JQI7 657 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 NMT2O60551 498 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 COBLO75128 1261 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 PCP11498 1178 aaKnown RBP23.11■■□□□ 1.29
TPM4-208ENST00000588410 CNGA1P29973 690 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 CYP2C19P33261 490 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 TTC22Q5TAA0 569 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 OLFML2BQ68BL8 750 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 SNRNP48Q6IEG0 339 aaKnown RBP23.11■■□□□ 1.29
TPM4-208ENST00000588410 NECAB2Q7Z6G3 386 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 CPXCR1Q8N123 301 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 GMCL1Q96IK5 515 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 PAWRQ96IZ0 340 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms