RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 SH3GLB2Q9NR46 395 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 TRAK2O60296 914 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 GDF11O95390 407 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 SCG2P13521 617 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 CALML3P27482 149 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 FOSBP53539 338 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 ZNF543Q08ER8 600 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 PKN1Q16512 942 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 FOXD4L6Q3SYB3 417 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 OTUD7BQ6GQQ9 843 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 USP17L2Q6R6M4 530 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 FOXD4L3Q6VB84 417 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 USP50Q70EL3 339 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 MIGA2Q7L4E1 593 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 STAG2Q8N3U4 1231 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 TMEM87AQ8NBN3 555 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 GMCL1P1Q8NEA9 526 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 CCDC12Q8WUD4 166 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 DCPSQ96C86 337 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 RRP36Q96EU6 259 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 FOXP1Q9H334 677 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 LMBRD1Q9NUN5 540 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
CHMP1B-202ENST00000588284 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 F5H6K3 240 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 MBD3O95983 291 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 MMP1P03956 469 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 U2AF2P26368 475 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 KLRC3Q07444 240 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 GALNT17Q6IS24 598 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 SIAH1Q8IUQ4 282 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 LRRC47Q8N1G4 583 aaKnown RBP12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 AIFM3Q96NN9 605 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 MYH8P13535 1937 aa12.11□□□□□ -0.47
CHMP1B-202ENST00000588284 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 PHF20L1A8MW92 1017 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 SLC1A4P43007 532 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 NLRP5P59047 1200 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 RRP1BQ14684 758 aaKnown RBP12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 GOPCQ9HD26 462 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 RCOR1Q9UKL0 485 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 ELP1O95163 1332 aa12.1□□□□□ -0.47
CHMP1B-202ENST00000588284 GOLGA6L4A6NEF3 574 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 BMP3P12645 472 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 KRT2P35908 639 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 UBE2HP62256 183 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 TRAF1Q13077 416 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 KLHL40Q2TBA0 621 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 DIS3L2Q8IYB7 885 aaKnown RBP12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 SPATA32Q96LK8 384 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 ZNF112Q9UJU3 913 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 SIPA1L1O43166 1804 aa12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 ASTN2O75129 1339 aaPredicted RBP12.09□□□□□ -0.47
CHMP1B-202ENST00000588284 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 BTBD18B2RXH4 712 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 FIBPO43427 364 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 CYTH3O43739 400 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 RAD21O60216 631 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 GNA11P29992 359 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 EPHX2P34913 555 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms