RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NRAPQ86VF7 1730 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 MYH6P13533 1939 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 AFF2P51816 1311 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 MAP2K7O14733 419 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 SEC31AO94979 1220 aaKnown RBP20.98■□□□□ 0.95
DDX39A-206ENST00000587730 OAS2P29728 719 aaKnown RBP20.98■□□□□ 0.95
DDX39A-206ENST00000587730 MTF1Q14872 753 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 KRT31Q15323 416 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 ZNF174Q15697 407 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 ZNF569Q5MCW4 686 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 RRAGBQ5VZM2 374 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 PDXDC2PQ6P474 469 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 ANKRD18AQ8IVF6 992 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 NOC3LQ8WTT2 800 aaKnown RBP20.98■□□□□ 0.95
DDX39A-206ENST00000587730 ABHD10Q9NUJ1 306 aa20.98■□□□□ 0.95
DDX39A-206ENST00000587730 XDHP47989 1333 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 PLEKHA8P1O95397 391 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 MCM3P25205 808 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 COPB1P53618 953 aaKnown RBP20.97■□□□□ 0.95
DDX39A-206ENST00000587730 STX17P56962 302 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 NLRP5P59047 1200 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 NPY5RQ15761 445 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 PFKFB3Q16875 520 aaPredicted RBP20.97■□□□□ 0.95
DDX39A-206ENST00000587730 CCDC178Q5BJE1 867 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 EXOC4Q96A65 974 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 SHISA4Q96DD7 197 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 ACBD3Q9H3P7 528 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 ATP8A2Q9NTI2 1148 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.97■□□□□ 0.95
DDX39A-206ENST00000587730 A0A1W2PQC6 194 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 STIM1Q13586 685 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 TCP11X2Q5H9J9 407 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 GALNT17Q6IS24 598 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 ADGRA1Q86SQ6 560 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 EHBP1Q8NDI1 1231 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 CRNKL1Q9BZJ0 848 aaKnown RBP20.97■□□□□ 0.95
DDX39A-206ENST00000587730 TSPYL1Q9H0U9 437 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 BSDC1Q9NW68 430 aaPredicted RBP20.97■□□□□ 0.95
DDX39A-206ENST00000587730 USP21Q9UK80 565 aa20.97■□□□□ 0.95
DDX39A-206ENST00000587730 CTAGE15A4D2H0 777 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 FAM205CA6NFA0 338 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 SASH3O75995 380 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 CTAGE8P0CG41 777 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 EEF1GP26641 437 aaKnown RBP20.96■□□□□ 0.95
DDX39A-206ENST00000587730 CRKLP46109 303 aaKnown RBP20.96■□□□□ 0.95
DDX39A-206ENST00000587730 MUM1L1Q5H9M0 696 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
DDX39A-206ENST00000587730 CLEC4GQ6UXB4 293 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 CTAGE6Q86UF2 777 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 CTAGE4Q8IX94 777 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 CPLX3Q8WVH0 158 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 MAGEF1Q9HAY2 307 aa20.96■□□□□ 0.95
DDX39A-206ENST00000587730 ARPP21Q9UBL0 812 aaPredicted RBP20.96■□□□□ 0.95
DDX39A-206ENST00000587730 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX39A-206ENST00000587730 KCNJ18B7U540 433 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 SNAP23O00161 211 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 PPP1R2P41236 205 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 GNAQP50148 359 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 KCNJ12Q14500 433 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 KCNB1Q14721 858 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
DDX39A-206ENST00000587730 TSR1Q2NL82 804 aaKnown RBP20.95■□□□□ 0.94
DDX39A-206ENST00000587730 SBK1Q52WX2 424 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 WWC2Q6AWC2 1192 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 CTR9Q6PD62 1173 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 ZNF662Q6ZS27 426 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 NELFBQ8WX92 580 aa20.95■□□□□ 0.94
DDX39A-206ENST00000587730 NUP88Q99567 741 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-206ENST00000587730 LAD1O00515 517 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 RPN1P04843 607 aaKnown RBP20.94■□□□□ 0.94
DDX39A-206ENST00000587730 FXR1P51114 621 aaKnown RBP eCLIP20.94■□□□□ 0.94
DDX39A-206ENST00000587730 POLR3GO15318 223 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-206ENST00000587730 PRDM1O75626 825 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 CCDC148Q8NFR7 591 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 RPGRIP1Q96KN7 1286 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 CUEDC2Q9H467 287 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 THAP9Q9H5L6 903 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 HAUS4Q9H6D7 363 aa20.94■□□□□ 0.94
DDX39A-206ENST00000587730 CACNA1SQ13698 1873 aa20.93■□□□□ 0.94
DDX39A-206ENST00000587730 ERICH4A6NGS2 130 aa20.93■□□□□ 0.94
DDX39A-206ENST00000587730 IQCDQ96DY2 449 aa20.93■□□□□ 0.94
DDX39A-206ENST00000587730 CWC15Q9P013 229 aaKnown RBP20.93■□□□□ 0.94
DDX39A-206ENST00000587730 BEND6Q5SZJ8 279 aaPredicted RBP20.92■□□□□ 0.94
DDX39A-206ENST00000587730 PIK3AP1Q6ZUJ8 805 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 SLC35F6Q8N357 371 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 SRBD1Q8N5C6 995 aaKnown RBP20.92■□□□□ 0.94
DDX39A-206ENST00000587730 RETREG2Q8NC44 543 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 OR8K1Q8NGG5 319 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 ANKZF1Q9H8Y5 726 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 KRT9P35527 623 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 CCT6AP40227 531 aaKnown RBP20.92■□□□□ 0.94
DDX39A-206ENST00000587730 STAT6P42226 847 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 CCDC47Q96A33 483 aaKnown RBP20.92■□□□□ 0.94
DDX39A-206ENST00000587730 NUP58Q9BVL2 599 aa20.92■□□□□ 0.94
DDX39A-206ENST00000587730 LGALS16A8MUM7 142 aa20.91■□□□□ 0.94
DDX39A-206ENST00000587730 USP17L12C9JPN9 530 aa20.91■□□□□ 0.94
DDX39A-206ENST00000587730 USP17L21D6R901 530 aa20.91■□□□□ 0.94
DDX39A-206ENST00000587730 GYG1P46976 350 aa20.91■□□□□ 0.94
DDX39A-206ENST00000587730 KRT83P78385 493 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms