RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 KLRC3Q07444 240 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 PLS1Q14651 629 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 CCDC178Q5BJE1 867 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 RRP12Q5JTH9 1297 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 MKL1Q969V6 931 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 SPATC1LQ9H0A9 340 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 FEM1BQ9UK73 627 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
PRKCSH-206ENST00000587509 STRNO43815 780 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 FDX1P10109 184 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 SLC1A4P43007 532 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 IKQ13123 557 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 FAM47AQ5JRC9 791 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 SIAH1Q8IUQ4 282 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 ATG4CQ96DT6 458 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 RNF208Q9H0X6 261 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 PORCNQ9H237 461 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 CNNM2Q9H8M5 875 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 LAMA4Q16363 1823 aa13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 KIAA0100Q14667 2235 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-206ENST00000587509 ZBED4O75132 1171 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 CNMDO75829 334 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 GJB1P08034 283 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 FGRP09769 529 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 BMP3P12645 472 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 CCL5P13501 91 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 ELNP15502 786 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 STAT2P52630 851 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 HAND2P61296 217 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 SLFN13Q68D06 897 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 FAM160B2Q86V87 743 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 ABRAQ8N0Z2 381 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 GMCL1Q96IK5 515 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 MYH4Q9Y623 1939 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 ZNF236Q9UL36 1845 aa13.83□□□□□ -0.2
PRKCSH-206ENST00000587509 VWA5AO00534 786 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 CYP2B6P20813 491 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 TRDNQ13061 729 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 GRB14Q14449 540 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 KIAA1755Q5JYT7 1200 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 MFSD14CQ5VZR4 134 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 KIAA1211Q6ZU35 1233 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 CHURC1Q8WUH1 139 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 MOV10L1Q9BXT6 1211 aaKnown RBP13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 KRT23Q9C075 422 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 TCP11L1Q9NUJ3 509 aa13.82□□□□□ -0.2
PRKCSH-206ENST00000587509 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 FCER1AP12319 257 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 ERCC3P19447 782 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 PTPREP23469 700 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 OAZ1P54368 228 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 KCTD2Q14681 263 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 CCDC96Q2M329 555 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 Q3C1V9 767 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 MORN1Q5T089 497 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 DPP9Q86TI2 863 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 DCAF4Q8WV16 495 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 KIFC2Q96AC6 838 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 HMX1Q9NP08 348 aaPredicted RBP13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 GJD2Q9UKL4 321 aa13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
PRKCSH-206ENST00000587509 CHMLP26374 656 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 STAT3P40763 770 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 GJA8P48165 433 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 BMP2KLQ5H9B9 411 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 RIOX2Q8IUF8 465 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 TRIB2Q92519 343 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 TTC14Q96N46 770 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 PNMA2Q9UL42 364 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
PRKCSH-206ENST00000587509 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
PRKCSH-206ENST00000587509 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
PRKCSH-206ENST00000587509 MSCO60682 206 aa13.79□□□□□ -0.2
PRKCSH-206ENST00000587509 PEX10O60683 326 aa13.79□□□□□ -0.2
PRKCSH-206ENST00000587509 HOXC6P09630 235 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms