RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PTPRFP10586 1907 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 IRF6O14896 467 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 CA12O43570 354 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 NT5C2P49902 561 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 PDE4BQ07343 736 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 ABCB5Q2M3G0 1257 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 DYNLL2Q96FJ2 89 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 WDR18Q9BV38 432 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 IL25Q9H293 177 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 CABP5Q9NP86 173 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 AFG3L2Q9Y4W6 797 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 ZHX2Q9Y6X8 837 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 LAMA4Q16363 1823 aa9.53□□□□□ -0.88
SMAD4-204ENST00000586253 RCCD1A6NED2 376 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 SMIM22K7EJ46 135 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
SMAD4-204ENST00000586253 TLL1O43897 1013 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 CDC45O75419 566 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 GDF11O95390 407 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 ALDH1A1P00352 501 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 GH2P01242 217 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 FGRP09769 529 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 PCP11498 1178 aaKnown RBP9.52□□□□□ -0.89
SMAD4-204ENST00000586253 CETPP11597 493 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 TMEM179Q6ZVK1 233 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 ZCCHC17Q9NP64 241 aaKnown RBP9.52□□□□□ -0.89
SMAD4-204ENST00000586253 SAGE1Q9NXZ1 904 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 CTNNA3Q9UI47 895 aa9.52□□□□□ -0.89
SMAD4-204ENST00000586253 GREB1LQ9C091 1923 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-204ENST00000586253 LOC285556D6RIA3 1793 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 CCL15-CCL14A0A0B4J2E2 113 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 A0A0G2JLL6 359 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-204ENST00000586253 RASA1P20936 1047 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 GGCXP38435 758 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 JAG1P78504 1218 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 CCL15Q16663 113 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 OTUD7BQ6GQQ9 843 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 FASTKD5Q7L8L6 764 aaKnown RBP9.51□□□□□ -0.89
SMAD4-204ENST00000586253 PRRT2Q7Z6L0 340 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-204ENST00000586253 HOMEZQ8IX15 550 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 ESYT1Q9BSJ8 1104 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 CFHR5Q9BXR6 569 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 MKNK2Q9HBH9 465 aa9.51□□□□□ -0.89
SMAD4-204ENST00000586253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD4-204ENST00000586253 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 TRIM75PA6NK02 468 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 C19orf81C9J6K1 198 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 MPHOSPH10O00566 681 aaKnown RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 ZNF213O14771 459 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 ORC4O43929 436 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 AKR1B1P15121 316 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 GUCY1A2P33402 732 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 BACE1P56817 501 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 SPP2Q13103 211 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 IMMTQ16891 758 aaKnown RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 KIAA1211Q6ZU35 1233 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 ZNF444Q8N0Y2 327 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 IL27Q8NEV9 243 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 BRI3BPQ8WY22 251 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 PTPN18Q99952 460 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 RNF41Q9H4P4 317 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 KANSL2Q9H9L4 492 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-204ENST00000586253 SLC45A1Q9Y2W3 748 aa9.5□□□□□ -0.89
SMAD4-204ENST00000586253 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 IGF2BP3O00425 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMAD4-204ENST00000586253 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
SMAD4-204ENST00000586253 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
SMAD4-204ENST00000586253 USP14P54578 494 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 ICA1Q05084 483 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 MOGSQ13724 837 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 SEPT2Q15019 361 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 AKNAD1Q5T1N1 836 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 ANKRD23Q86SG2 305 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 CCDC84Q86UT8 332 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-204ENST00000586253 MAP4K1Q92918 833 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 C12orf42Q96LP6 360 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 LSG1Q9H089 658 aaKnown RBP9.49□□□□□ -0.89
SMAD4-204ENST00000586253 KIAA1683Q9H0B3 1180 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 SH2D4AQ9H788 454 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 ARHGEF10LQ9HCE6 1279 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 SYNPO2Q9UMS6 1093 aa9.49□□□□□ -0.89
SMAD4-204ENST00000586253 IGKV6D-41A0A0C4DH26 115 aa9.48□□□□□ -0.89
SMAD4-204ENST00000586253 BTBD19C9JJ37 291 aa9.48□□□□□ -0.89
SMAD4-204ENST00000586253 PRDM1O75626 825 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms