RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 TMEM47Q9BQJ4 181 aa15.37■□□□□ 0.05
DNMT1-205ENST00000585920 ZCCHC17Q9NP64 241 aaKnown RBP15.37■□□□□ 0.05
DNMT1-205ENST00000585920 WBP1LQ9NX94 342 aa15.37■□□□□ 0.05
DNMT1-205ENST00000585920 SLC45A1Q9Y2W3 748 aa15.37■□□□□ 0.05
DNMT1-205ENST00000585920 TNKSO95271 1327 aa15.37■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 VCAM1P19320 739 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 HOXA7P31268 230 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 TAF1CQ15572 869 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 TMEM67Q5HYA8 995 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 SLFN13Q68D06 897 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 RCSD1Q6JBY9 416 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 DHX32Q7L7V1 743 aaKnown RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 ENAHQ8N8S7 591 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 GMCL1P1Q8NEA9 526 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 MTA3Q9BTC8 594 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 RPAP3Q9H6T3 665 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 KAT14Q9H8E8 782 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
DNMT1-205ENST00000585920 ZFYVE28Q9HCC9 887 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 PNMA3Q9UL41 463 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 MTMR7Q9Y216 660 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 ATAD5Q96QE3 1844 aa15.36■□□□□ 0.05
DNMT1-205ENST00000585920 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
DNMT1-205ENST00000585920 CA12O43570 354 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 NDUFB10O96000 172 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 ANTXR2P58335 489 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-205ENST00000585920 WTAPQ15007 396 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 BLOC1S2Q6QNY1 142 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 IGDCC4Q8TDY8 1250 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 TMEM87BQ96K49 555 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 PARK7Q99497 189 aaKnown RBP15.35■□□□□ 0.05
DNMT1-205ENST00000585920 TANGO6Q9C0B7 1094 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 SAGE1Q9NXZ1 904 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
DNMT1-205ENST00000585920 LAMA4Q16363 1823 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 MYH8P13535 1937 aa15.35■□□□□ 0.05
DNMT1-205ENST00000585920 TBC1D8O95759 1140 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 CYP2C8P10632 490 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 ANAPC15P60006 121 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 FGD1P98174 961 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 SEC23AQ15436 765 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 CATSPERGQ6ZRH7 1159 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 TMTC2Q8N394 836 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 CHMP4CQ96CF2 233 aa15.34■□□□□ 0.05
DNMT1-205ENST00000585920 ASCC2Q9H1I8 757 aaPredicted RBP15.34■□□□□ 0.05
DNMT1-205ENST00000585920 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.05
DNMT1-205ENST00000585920 BMP3P12645 472 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
DNMT1-205ENST00000585920 SLC1A4P43007 532 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
DNMT1-205ENST00000585920 CRHR2Q13324 411 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 COL9A3Q14050 684 aaPredicted RBP15.33■□□□□ 0.04
DNMT1-205ENST00000585920 COG2Q14746 738 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 NFXL1Q6ZNB6 911 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 PNMA1Q8ND90 353 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 SMCR8Q8TEV9 937 aaPredicted RBP15.33■□□□□ 0.04
DNMT1-205ENST00000585920 GMCL1Q96IK5 515 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 NUP88Q99567 741 aaPredicted RBP15.33■□□□□ 0.04
DNMT1-205ENST00000585920 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
DNMT1-205ENST00000585920 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 BACH2Q9BYV9 841 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 TM6SF1Q9BZW5 370 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 CYP46A1Q9Y6A2 500 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 WDR19Q8NEZ3 1342 aa15.33■□□□□ 0.04
DNMT1-205ENST00000585920 SH2B2O14492 632 aaPredicted RBP15.32■□□□□ 0.04
DNMT1-205ENST00000585920 FLOT1O75955 427 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 CPA1P15085 419 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 CATIPQ7Z7H3 387 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 DCAF4Q8WV16 495 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 TCEANC2Q96MN5 208 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 ZSWIM6Q9HCJ5 1215 aa15.32■□□□□ 0.04
DNMT1-205ENST00000585920 GPHNQ9NQX3 736 aaPredicted RBP15.32■□□□□ 0.04
DNMT1-205ENST00000585920 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
DNMT1-205ENST00000585920 CCDC69A6NI79 296 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 TLR2O60603 784 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 HSPA1AP0DMV8 641 aaKnown RBP15.31■□□□□ 0.04
DNMT1-205ENST00000585920 HSPA1BP0DMV9 641 aaKnown RBP15.31■□□□□ 0.04
DNMT1-205ENST00000585920 TIE1P35590 1138 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 LIFRP42702 1097 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
DNMT1-205ENST00000585920 CCDC96Q2M329 555 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 CFHR5Q9BXR6 569 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms