RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 CCNA1P78396 465 aa24.64■■□□□ 1.54
TOP3A-218ENST00000584669 SKAP1Q86WV1 359 aa24.64■■□□□ 1.54
TOP3A-218ENST00000584669 DIS3LQ8TF46 1054 aaKnown RBP24.64■■□□□ 1.54
TOP3A-218ENST00000584669 LPAR1Q92633 364 aa24.64■■□□□ 1.54
TOP3A-218ENST00000584669 SPDYE16A6NNV3 312 aaPredicted RBP24.63■■□□□ 1.53
TOP3A-218ENST00000584669 CNMDO75829 334 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 RGS2P41220 211 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 TFAP4Q01664 338 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 CENPQQ7L2Z9 268 aaPredicted RBP24.63■■□□□ 1.53
TOP3A-218ENST00000584669 CEP95Q96GE4 821 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 PAWRQ96IZ0 340 aaKnown RBP24.63■■□□□ 1.53
TOP3A-218ENST00000584669 IL25Q9H293 177 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 NYAP2Q9P242 653 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 PLIN4Q96Q06 1357 aa24.63■■□□□ 1.53
TOP3A-218ENST00000584669 ZMYM6O95789 1325 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 RAD21O60216 631 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 EVI5O60447 810 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 TSPY3P0CV98 308 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 TSPY8P0CW00 308 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 CAPN2P17655 700 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 HAND2P61296 217 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 NEDD1Q8NHV4 660 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 GOPCQ9HD26 462 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 CLIP2Q9UDT6 1046 aa24.62■■□□□ 1.53
TOP3A-218ENST00000584669 ZNFX1Q9P2E3 1918 aaKnown RBP24.61■■□□□ 1.53
TOP3A-218ENST00000584669 XRCC5P13010 732 aaKnown RBP24.61■■□□□ 1.53
TOP3A-218ENST00000584669 CCL14Q16627 93 aa24.61■■□□□ 1.53
TOP3A-218ENST00000584669 NECAB2Q7Z6G3 386 aa24.61■■□□□ 1.53
TOP3A-218ENST00000584669 TRMT44Q8IYL2 757 aaKnown RBP24.61■■□□□ 1.53
TOP3A-218ENST00000584669 APBA2Q99767 749 aa24.61■■□□□ 1.53
TOP3A-218ENST00000584669 MTMR4Q9NYA4 1195 aa24.61■■□□□ 1.53
TOP3A-218ENST00000584669 PCDH10Q9P2E7 1040 aa24.61■■□□□ 1.53
TOP3A-218ENST00000584669 WDR46O15213 610 aaKnown RBP24.6■■□□□ 1.53
TOP3A-218ENST00000584669 COG2Q14746 738 aa24.6■■□□□ 1.53
TOP3A-218ENST00000584669 MORN1Q5T089 497 aa24.6■■□□□ 1.53
TOP3A-218ENST00000584669 LBX2Q6XYB7 198 aa24.6■■□□□ 1.53
TOP3A-218ENST00000584669 NBPF3Q9H094 633 aa24.6■■□□□ 1.53
TOP3A-218ENST00000584669 BTBD7Q9P203 1132 aa24.6■■□□□ 1.53
TOP3A-218ENST00000584669 FXR1P51114 621 aaKnown RBP eCLIP24.59■■□□□ 1.53
TOP3A-218ENST00000584669 SAMD1Q6SPF0 538 aaPredicted RBP24.59■■□□□ 1.53
TOP3A-218ENST00000584669 USP6NLQ92738 828 aa24.59■■□□□ 1.53
TOP3A-218ENST00000584669 IVNS1ABPQ9Y6Y0 642 aa24.59■■□□□ 1.53
TOP3A-218ENST00000584669 TSPY2A6NKD2 308 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 ORC4O43929 436 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 RANBP6O60518 1105 aaKnown RBP24.58■■□□□ 1.53
TOP3A-218ENST00000584669 NMT2O60551 498 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 FLOT1O75955 427 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 TTLL1O95922 423 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 FGRP09769 529 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 CHMLP26374 656 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 MAP2K5Q13163 448 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 FAM83BQ5T0W9 1011 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 MAP3K21Q5TCX8 1036 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 TBC1D10CQ8IV04 446 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 NUP88Q99567 741 aaPredicted RBP24.58■■□□□ 1.53
TOP3A-218ENST00000584669 TOMM22Q9NS69 142 aa24.58■■□□□ 1.53
TOP3A-218ENST00000584669 F5H6K3 240 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 DSG3P32926 999 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 KLRC3Q07444 240 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 CACNB2Q08289 660 aaPredicted RBP24.57■■□□□ 1.52
TOP3A-218ENST00000584669 RRP12Q5JTH9 1297 aaKnown RBP24.57■■□□□ 1.52
TOP3A-218ENST00000584669 LRRC47Q8N1G4 583 aaKnown RBP24.57■■□□□ 1.52
TOP3A-218ENST00000584669 ANKLE1Q8NAG6 615 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 MKL1Q969V6 931 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 ATG4CQ96DT6 458 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 IL17RBQ9NRM6 502 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 FBXO28Q9NVF7 368 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 HOXC10Q9NYD6 342 aa24.57■■□□□ 1.52
TOP3A-218ENST00000584669 NDUFB10O96000 172 aa24.56■■□□□ 1.52
TOP3A-218ENST00000584669 CCDC136Q96JN2 1154 aa24.56■■□□□ 1.52
TOP3A-218ENST00000584669 DSCC1Q9BVC3 393 aa24.56■■□□□ 1.52
TOP3A-218ENST00000584669 RBM27Q9P2N5 1060 aaKnown RBP24.56■■□□□ 1.52
TOP3A-218ENST00000584669 SLC15A5A6NIM6 579 aa24.55■■□□□ 1.52
TOP3A-218ENST00000584669 PTPREP23469 700 aa24.55■■□□□ 1.52
TOP3A-218ENST00000584669 CCND3P30281 292 aaPredicted RBP24.55■■□□□ 1.52
TOP3A-218ENST00000584669 AKNAD1Q5T1N1 836 aa24.55■■□□□ 1.52
TOP3A-218ENST00000584669 NEFLP07196 543 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 MFSD14CQ5VZR4 134 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 C7orf61Q8IZ16 206 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 STAG1Q8WVM7 1258 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 C11orf49Q9H6J7 331 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 OGDHLQ9ULD0 1010 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 RAD50Q92878 1312 aa24.54■■□□□ 1.52
TOP3A-218ENST00000584669 ZNF213O14771 459 aa24.53■■□□□ 1.52
TOP3A-218ENST00000584669 PLS1Q14651 629 aa24.53■■□□□ 1.52
TOP3A-218ENST00000584669 MFSD6Q6ZSS7 791 aa24.53■■□□□ 1.52
TOP3A-218ENST00000584669 RUFY2Q8WXA3 655 aa24.53■■□□□ 1.52
TOP3A-218ENST00000584669 NEDD4P46934 1319 aa24.53■■□□□ 1.52
TOP3A-218ENST00000584669 GMCL1P1Q8NEA9 526 aa24.52■■□□□ 1.52
TOP3A-218ENST00000584669 CHMP4CQ96CF2 233 aa24.52■■□□□ 1.52
TOP3A-218ENST00000584669 MOV10L1Q9BXT6 1211 aaKnown RBP24.52■■□□□ 1.52
TOP3A-218ENST00000584669 FLRT1Q9NZU1 646 aa24.52■■□□□ 1.52
TOP3A-218ENST00000584669 SYNPO2Q9UMS6 1093 aa24.52■■□□□ 1.52
TOP3A-218ENST00000584669 ADAMTS5Q9UNA0 930 aa24.52■■□□□ 1.52
TOP3A-218ENST00000584669 STX8Q9UNK0 236 aa24.52■■□□□ 1.52
TOP3A-218ENST00000584669 PLXNA1Q9UIW2 1896 aa24.51■■□□□ 1.51
TOP3A-218ENST00000584669 ALPK3Q96L96 1907 aa24.51■■□□□ 1.51
TOP3A-218ENST00000584669 MNX1P50219 401 aaPredicted RBP24.51■■□□□ 1.51
TOP3A-218ENST00000584669 PTH1RQ03431 593 aa24.51■■□□□ 1.51
TOP3A-218ENST00000584669 GRB14Q14449 540 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms