RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SLU7O95391 586 aaKnown RBP12.75□□□□□ -0.37
TOP3A-217ENST00000584582 BMP15O95972 392 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 MMP10P09238 476 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 ZNF569Q5MCW4 686 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 SRRTQ9BXP5 876 aaKnown RBP12.75□□□□□ -0.37
TOP3A-217ENST00000584582 TMEM260Q9NX78 707 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 MRC1P22897 1456 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 WNT7AO00755 349 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 HSPA1LP34931 641 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 SPECC1LQ69YQ0 1117 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 MTERF4Q7Z6M4 381 aaKnown RBP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 PSMA7O14818 248 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 TDRD12Q587J7 1177 aaKnown RBP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 SLF1Q9BQI6 1058 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 EPC1Q9H2F5 836 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 TCEAL9Q9UHQ7 104 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 LEMD3Q9Y2U8 911 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 CCP110O43303 1012 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 DDAH1O94760 285 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 GNA11P29992 359 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 KRT9P35527 623 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 FKBP15Q5T1M5 1219 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 FERMT2Q96AC1 680 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 SLC39A2Q9NP94 309 aa12.74□□□□□ -0.37
TOP3A-217ENST00000584582 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 ARGLU1Q9NWB6 273 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-217ENST00000584582 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 PLCG2P16885 1265 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 PAK1Q13153 545 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 WWC2Q6AWC2 1192 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 CABP7Q86V35 215 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 NELFCDQ8IXH7 590 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 PPP1R13BQ96KQ4 1090 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 PSMB7Q99436 277 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 IRX2Q9BZI1 471 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-217ENST00000584582 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-217ENST00000584582 CHMP2AO43633 222 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 SLC1A4P43007 532 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 EVCP57679 992 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 MTF1Q14872 753 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 CSGALNACT2Q8N6G5 542 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 TBCKQ8TEA7 893 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 CAPZA3Q96KX2 299 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
TOP3A-217ENST00000584582 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-217ENST00000584582 SLFN14P0C7P3 912 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 CASP14P31944 242 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 FAM193AP78312 1265 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 LRRC41Q15345 812 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 VPS72Q15906 364 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 FNBP4Q8N3X1 1017 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-217ENST00000584582 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
TOP3A-217ENST00000584582 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-217ENST00000584582 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
TOP3A-217ENST00000584582 SOWAHDA6NJG2 315 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 C12orf60Q5U649 245 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 CACNA2D4Q7Z3S7 1137 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 MAP3K14Q99558 947 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 UBXN2AP68543 259 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 PLS1Q14651 629 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 SNX29Q8TEQ0 813 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 LRRC4BQ9NT99 713 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 MYO1BO43795 1136 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 RHOXF2BP0C7M4 288 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 SEC23AQ15436 765 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 FEZ1Q99689 392 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 RHOXF2Q9BQY4 288 aa12.72□□□□□ -0.37
TOP3A-217ENST00000584582 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 WDR19Q8NEZ3 1342 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 SEMA3EO15041 775 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 CCDC175P0C221 793 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 TBC1D8BQ0IIM8 1120 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 KRT79Q5XKE5 535 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
TOP3A-217ENST00000584582 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.38
TOP3A-217ENST00000584582 RBL2Q08999 1139 aa12.71□□□□□ -0.38
TOP3A-217ENST00000584582 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.38
TOP3A-217ENST00000584582 ZNF384Q8TF68 577 aa12.71□□□□□ -0.38
TOP3A-217ENST00000584582 TIGD1Q96MW7 591 aa12.71□□□□□ -0.38
TOP3A-217ENST00000584582 FAM207AQ9NSI2 230 aaPredicted RBP12.71□□□□□ -0.38
TOP3A-217ENST00000584582 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms