RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 ELNP15502 786 aa29.41■■■□□ 2.3
TTC39C-209ENST00000584250 BMP2KLQ5H9B9 411 aa29.41■■■□□ 2.3
TTC39C-209ENST00000584250 GRK4P32298 578 aa29.4■■■□□ 2.3
TTC39C-209ENST00000584250 NOVP48745 357 aa29.4■■■□□ 2.3
TTC39C-209ENST00000584250 TAF6LQ9Y6J9 622 aa29.4■■■□□ 2.3
TTC39C-209ENST00000584250 SLFN13Q68D06 897 aa29.39■■■□□ 2.3
TTC39C-209ENST00000584250 GPR142Q7Z601 462 aa29.39■■■□□ 2.3
TTC39C-209ENST00000584250 GMCL1P1Q8NEA9 526 aa29.39■■■□□ 2.3
TTC39C-209ENST00000584250 MOV10L1Q9BXT6 1211 aaKnown RBP29.39■■■□□ 2.3
TTC39C-209ENST00000584250 PPP1R9AQ9ULJ8 1098 aa29.39■■■□□ 2.3
TTC39C-209ENST00000584250 ADAMTS5Q9UNA0 930 aa29.39■■■□□ 2.3
TTC39C-209ENST00000584250 POTEFA5A3E0 1075 aa29.38■■■□□ 2.29
TTC39C-209ENST00000584250 ADCY3O60266 1144 aa29.38■■■□□ 2.29
TTC39C-209ENST00000584250 MAPK4P31152 587 aa29.38■■■□□ 2.29
TTC39C-209ENST00000584250 MTFR1Q15390 333 aa29.38■■■□□ 2.29
TTC39C-209ENST00000584250 IMMTQ16891 758 aaKnown RBP29.38■■■□□ 2.29
TTC39C-209ENST00000584250 ZKSCAN3Q9BRR0 538 aa29.38■■■□□ 2.29
TTC39C-209ENST00000584250 KIAA0100Q14667 2235 aaKnown RBP29.38■■■□□ 2.29
TTC39C-209ENST00000584250 B4E1Z4 1266 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 IRF5Q13568 498 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 TMEM132BQ14DG7 1078 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 RCSD1Q6JBY9 416 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 SPATC1LQ9H0A9 340 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 RNF41Q9H4P4 317 aaPredicted RBP29.37■■■□□ 2.29
TTC39C-209ENST00000584250 CTNNA3Q9UI47 895 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 MTMR7Q9Y216 660 aa29.37■■■□□ 2.29
TTC39C-209ENST00000584250 KDM4AO75164 1064 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 MCCP23508 829 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 PLS1Q14651 629 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 WDR78Q5VTH9 848 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 PLEKHH3Q7Z736 793 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 REPS2Q8NFH8 660 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 ESYT1Q9BSJ8 1104 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 TCP11L1Q9NUJ3 509 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 SYNPO2Q9UMS6 1093 aa29.36■■■□□ 2.29
TTC39C-209ENST00000584250 VWA5AO00534 786 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 PCP11498 1178 aaKnown RBP29.35■■■□□ 2.29
TTC39C-209ENST00000584250 CYP2B6P20813 491 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 MORN1Q5T089 497 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 NBPF11Q86T75 865 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 CCAR1Q8IX12 1150 aaKnown RBP29.35■■■□□ 2.29
TTC39C-209ENST00000584250 USP6NLQ92738 828 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 SLF1Q9BQI6 1058 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 TMEM47Q9BQJ4 181 aa29.35■■■□□ 2.29
TTC39C-209ENST00000584250 CYP21A2P08686 494 aa29.34■■■□□ 2.29
TTC39C-209ENST00000584250 CCNA1P78396 465 aa29.34■■■□□ 2.29
TTC39C-209ENST00000584250 MB21D1Q8N884 522 aa29.34■■■□□ 2.29
TTC39C-209ENST00000584250 ESR2Q92731 530 aa29.34■■■□□ 2.29
TTC39C-209ENST00000584250 PPP4R2Q9NY27 417 aa29.34■■■□□ 2.29
TTC39C-209ENST00000584250 BMP3P12645 472 aa29.33■■■□□ 2.29
TTC39C-209ENST00000584250 ERCC3P19447 782 aa29.33■■■□□ 2.29
TTC39C-209ENST00000584250 TRIM32Q13049 653 aa29.33■■■□□ 2.29
TTC39C-209ENST00000584250 KCTD1Q719H9 257 aa29.33■■■□□ 2.29
TTC39C-209ENST00000584250 SLAIN1Q8ND83 568 aa29.33■■■□□ 2.29
TTC39C-209ENST00000584250 MAP4K1Q92918 833 aa29.33■■■□□ 2.29
TTC39C-209ENST00000584250 BIN2Q9UBW5 565 aaPredicted RBP29.33■■■□□ 2.29
TTC39C-209ENST00000584250 RGS19P49795 217 aa29.32■■■□□ 2.28
TTC39C-209ENST00000584250 KIFC2Q96AC6 838 aa29.32■■■□□ 2.28
TTC39C-209ENST00000584250 GMCL1Q96IK5 515 aa29.32■■■□□ 2.28
TTC39C-209ENST00000584250 NUDT12Q9BQG2 462 aa29.32■■■□□ 2.28
TTC39C-209ENST00000584250 LSG1Q9H089 658 aaKnown RBP29.32■■■□□ 2.28
TTC39C-209ENST00000584250 ZSWIM5Q9P217 1185 aa29.32■■■□□ 2.28
TTC39C-209ENST00000584250 ZNF214Q9UL59 606 aaPredicted RBP29.32■■■□□ 2.28
TTC39C-209ENST00000584250 ISY1Q9ULR0 285 aaKnown RBP29.32■■■□□ 2.28
TTC39C-209ENST00000584250 U3KPZ7 1027 aaPredicted RBP29.32■■■□□ 2.28
TTC39C-209ENST00000584250 TMEM232C9JQI7 657 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 INHAP05111 366 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 PTPREP23469 700 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 CCL14Q16627 93 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 STOX1Q6ZVD7 989 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 PXYLP1Q8TE99 480 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 TRIB2Q92519 343 aa29.31■■■□□ 2.28
TTC39C-209ENST00000584250 RBM8AQ9Y5S9 174 aaKnown RBP29.31■■■□□ 2.28
TTC39C-209ENST00000584250 TOP1P11387 765 aaKnown RBP29.3■■■□□ 2.28
TTC39C-209ENST00000584250 SLC1A4P43007 532 aa29.3■■■□□ 2.28
TTC39C-209ENST00000584250 PPP4R3BQ5MIZ7 849 aa29.3■■■□□ 2.28
TTC39C-209ENST00000584250 CYB5R4Q7L1T6 521 aa29.3■■■□□ 2.28
TTC39C-209ENST00000584250 PRPF38AQ8NAV1 312 aaKnown RBP29.3■■■□□ 2.28
TTC39C-209ENST00000584250 CWC22Q9HCG8 908 aaKnown RBP29.3■■■□□ 2.28
TTC39C-209ENST00000584250 FEM1BQ9UK73 627 aa29.3■■■□□ 2.28
TTC39C-209ENST00000584250 EN2P19622 333 aaPredicted RBP29.29■■■□□ 2.28
TTC39C-209ENST00000584250 NCAPG2Q86XI2 1143 aa29.29■■■□□ 2.28
TTC39C-209ENST00000584250 SHCBP1Q8NEM2 672 aa29.29■■■□□ 2.28
TTC39C-209ENST00000584250 SOCS4Q8WXH5 440 aa29.29■■■□□ 2.28
TTC39C-209ENST00000584250 UNC93B1Q9H1C4 597 aa29.29■■■□□ 2.28
TTC39C-209ENST00000584250 RBBP6Q7Z6E9 1792 aaKnown RBP29.29■■■□□ 2.28
TTC39C-209ENST00000584250 CCL5P13501 91 aa29.28■■■□□ 2.28
TTC39C-209ENST00000584250 MAP2K5Q13163 448 aa29.28■■■□□ 2.28
TTC39C-209ENST00000584250 GRB14Q14449 540 aa29.28■■■□□ 2.28
TTC39C-209ENST00000584250 TTBK2Q6IQ55 1244 aa29.28■■■□□ 2.28
TTC39C-209ENST00000584250 RIPK3Q9Y572 518 aa29.28■■■□□ 2.28
TTC39C-209ENST00000584250 BRCA2P51587 3418 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 SLC15A5A6NIM6 579 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 STAT3P40763 770 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 SNAP25P60880 206 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 ERICH6BQ5W0A0 696 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 RIOX2Q8IUF8 465 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 CPXCR1Q8N123 301 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 NPLOC4Q8TAT6 608 aa29.27■■■□□ 2.28
TTC39C-209ENST00000584250 TTC14Q96N46 770 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms