RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 USP17L20D6RJB6 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 DHX16O60231 1041 aaKnown RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 FLOT1O75955 427 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 ALDH1A1P00352 501 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 GOLGA8HP0CJ92 632 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 HSPA1AP0DMV8 641 aaKnown RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 HSPA1BP0DMV9 641 aaKnown RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 SLC1A4P43007 532 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 ANTXR2P58335 489 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L24Q0WX57 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 CRHR2Q13324 411 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 MOGSQ13724 837 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PLS1Q14651 629 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 Q6ZUG5 572 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 DHX32Q7L7V1 743 aaKnown RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 CATIPQ7Z7H3 387 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PROCA1Q8NCQ7 364 aaPredicted RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PNMA1Q8ND90 353 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 TTC14Q96N46 770 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PARK7Q99497 189 aaKnown RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 P2RX7Q99572 595 aaKnown RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 ASCC2Q9H1I8 757 aaPredicted RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 TCP11L1Q9NUJ3 509 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 CPA4Q9UI42 421 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 CYP46A1Q9Y6A2 500 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 GREB1LQ9C091 1923 aaPredicted RBP9.78□□□□□ -0.84
ERBB2-216ENST00000584014 PLIN4Q96Q06 1357 aa9.77□□□□□ -0.84
ERBB2-216ENST00000584014 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
ERBB2-216ENST00000584014 TMEM232C9JQI7 657 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 PEX10O60683 326 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 BMP3P12645 472 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 PDIA4P13667 645 aaKnown RBP9.77□□□□□ -0.85
ERBB2-216ENST00000584014 RXRAP19793 462 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 RPS6KB1P23443 525 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 SLC16A2P36021 539 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 SNAP25P60880 206 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 WDR78Q5VTH9 848 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 DGKHQ86XP1 1220 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 CCAR1Q8IX12 1150 aaKnown RBP9.77□□□□□ -0.85
ERBB2-216ENST00000584014 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 ANKRD13CQ8N6S4 541 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 PIBF1Q8WXW3 757 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 LPAR1Q92633 364 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 MKL1Q969V6 931 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 TMEM87BQ96K49 555 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 BACH2Q9BYV9 841 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 R3HDMLQ9H3Y0 253 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 CWC22Q9HCG8 908 aaKnown RBP9.77□□□□□ -0.85
ERBB2-216ENST00000584014 VAT1LQ9HCJ6 419 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 FBXO28Q9NVF7 368 aa9.77□□□□□ -0.85
ERBB2-216ENST00000584014 KLF18A0A0U1RQI7 1052 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 SH2B2O14492 632 aaPredicted RBP9.76□□□□□ -0.85
ERBB2-216ENST00000584014 WDR46O15213 610 aaKnown RBP9.76□□□□□ -0.85
ERBB2-216ENST00000584014 FOXN1O15353 648 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 EPB41L2O43491 1005 aaKnown RBP9.76□□□□□ -0.85
ERBB2-216ENST00000584014 CA12O43570 354 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
ERBB2-216ENST00000584014 APOBRQ0VD83 1088 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 COG2Q14746 738 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 SEC23AQ15436 765 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 TSGA10IPQ3SY00 556 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 TTBK2Q6IQ55 1244 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 CATSPERGQ6ZRH7 1159 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 RUFY3Q7L099 469 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 CPXCR1Q8N123 301 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 IGDCC4Q8TDY8 1250 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 BRF1Q92994 677 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 UBA5Q9GZZ9 404 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 CPVLQ9H3G5 476 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 LY9Q9HBG7 655 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 PDRG1Q9NUG6 133 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 WBP1LQ9NX94 342 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
ERBB2-216ENST00000584014 LOC285556D6RIA3 1793 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 NT5C2P49902 561 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 NEK4P51957 841 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 LBX1P52954 281 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 HERVK_113P62684 666 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 EXOSC10Q01780 885 aaKnown RBP9.75□□□□□ -0.85
ERBB2-216ENST00000584014 MICU3Q86XE3 530 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 JMYQ8N9B5 988 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 GMCL1P1Q8NEA9 526 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 CHURC1Q8WUH1 139 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 DCAF4Q8WV16 495 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 KCNB2Q92953 911 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 ATG4CQ96DT6 458 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 C12orf42Q96LP6 360 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
ERBB2-216ENST00000584014 GOLGA8BA8MQT2 603 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 TLR2O60603 784 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms