RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 CAP2P40123 477 aa18.35■□□□□ 0.53
SPECC1-220ENST00000583463 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
SPECC1-220ENST00000583463 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
SPECC1-220ENST00000583463 DYNLL2Q96FJ2 89 aa18.35■□□□□ 0.53
SPECC1-220ENST00000583463 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
SPECC1-220ENST00000583463 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
SPECC1-220ENST00000583463 MORF4L1Q9UBU8 362 aa18.35■□□□□ 0.53
SPECC1-220ENST00000583463 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
SPECC1-220ENST00000583463 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
SPECC1-220ENST00000583463 PDE4BQ07343 736 aa18.34■□□□□ 0.53
SPECC1-220ENST00000583463 SH3D19Q5HYK7 790 aa18.34■□□□□ 0.53
SPECC1-220ENST00000583463 AKNAD1Q5T1N1 836 aa18.34■□□□□ 0.53
SPECC1-220ENST00000583463 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
SPECC1-220ENST00000583463 RBPJLQ9UBG7 517 aa18.34■□□□□ 0.53
SPECC1-220ENST00000583463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
SPECC1-220ENST00000583463 SHMT1P34896 483 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 CDK8P49336 464 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 SLC44A5Q8NCS7 719 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 USP6NLQ92738 828 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 KCNB2Q92953 911 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 FLRT1Q9NZU1 646 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 RLFQ13129 1914 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 PRUNE2Q8WUY3 3088 aa18.33■□□□□ 0.52
SPECC1-220ENST00000583463 NEDD4P46934 1319 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 USP17L5A8MUK1 530 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 ORC4O43929 436 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 FGRP09769 529 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 MFSD6Q6ZSS7 791 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 STK11IPQ8N1F8 1099 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
SPECC1-220ENST00000583463 GDF11O95390 407 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 CAPN2P17655 700 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 NT5C2P49902 561 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 ATN1P54259 1190 aaPredicted RBP18.31■□□□□ 0.52
SPECC1-220ENST00000583463 HERVK_113P62684 666 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 KRT32Q14532 448 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 TSGA10IPQ3SY00 556 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 TATDN1Q6P1N9 297 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 NUDT12Q9BQG2 462 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 MKNK2Q9HBH9 465 aa18.31■□□□□ 0.52
SPECC1-220ENST00000583463 E7EWF7 191 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 PRDM1O75626 825 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 RASA1P20936 1047 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
SPECC1-220ENST00000583463 MORN1Q5T089 497 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 STOX1Q6ZVD7 989 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 TACC3Q9Y6A5 838 aa18.3■□□□□ 0.52
SPECC1-220ENST00000583463 SPTBN5Q9NRC6 3674 aaKnown RBP18.3■□□□□ 0.52
SPECC1-220ENST00000583463 CNMDO75829 334 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 ANAPC15P60006 121 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 TRDNQ13061 729 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 GPR142Q7Z601 462 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 RALYLQ86SE5 291 aaKnown RBP18.29■□□□□ 0.52
SPECC1-220ENST00000583463 GPRC5AQ8NFJ5 357 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 C22orf23Q9BZE7 217 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 KRT23Q9C075 422 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
SPECC1-220ENST00000583463 CDH23Q9H251 3354 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 GREB1LQ9C091 1923 aaPredicted RBP18.29■□□□□ 0.52
SPECC1-220ENST00000583463 PLIN4Q96Q06 1357 aa18.29■□□□□ 0.52
SPECC1-220ENST00000583463 BACE1P56817 501 aa18.28■□□□□ 0.52
SPECC1-220ENST00000583463 CERKLQ49MI3 558 aaPredicted RBP18.28■□□□□ 0.52
SPECC1-220ENST00000583463 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
SPECC1-220ENST00000583463 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
SPECC1-220ENST00000583463 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
SPECC1-220ENST00000583463 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
SPECC1-220ENST00000583463 ESR2Q92731 530 aa18.28■□□□□ 0.52
SPECC1-220ENST00000583463 INCENPQ9NQS7 918 aa18.28■□□□□ 0.52
SPECC1-220ENST00000583463 EMILIN3Q9NT22 766 aa18.28■□□□□ 0.52
SPECC1-220ENST00000583463 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
SPECC1-220ENST00000583463 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
SPECC1-220ENST00000583463 HOXA7P31268 230 aaPredicted RBP18.27■□□□□ 0.52
SPECC1-220ENST00000583463 RBM25P49756 843 aaKnown RBP18.27■□□□□ 0.52
SPECC1-220ENST00000583463 ERVK-9P63128 1117 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 ERVK-24P63145 666 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 PABPC4Q13310 644 aaKnown RBP eCLIP18.27■□□□□ 0.52
SPECC1-220ENST00000583463 TRPV1Q8NER1 839 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 IL17RAQ96F46 866 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 TBC1D32Q96NH3 1257 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 CDX2Q99626 313 aaPredicted RBP18.27■□□□□ 0.52
SPECC1-220ENST00000583463 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 GINM1Q9NU53 330 aa18.27■□□□□ 0.52
SPECC1-220ENST00000583463 TSPY2A6NKD2 308 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 B4E1Z4 1266 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 AKR1B1P15121 316 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 SHHQ15465 462 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
SPECC1-220ENST00000583463 ABCB5Q2M3G0 1257 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 ZBTB21Q9ULJ3 1066 aa18.26■□□□□ 0.51
SPECC1-220ENST00000583463 MPHOSPH10O00566 681 aaKnown RBP18.25■□□□□ 0.51
SPECC1-220ENST00000583463 KDM4AO75164 1064 aa18.25■□□□□ 0.51
SPECC1-220ENST00000583463 GH2P01242 217 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms