RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 GMCL1Q96IK5 515 aa15.26■□□□□ 0.03
ERBB2-215ENST00000583391 PARK7Q99497 189 aaKnown RBP15.26■□□□□ 0.03
ERBB2-215ENST00000583391 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-215ENST00000583391 PNMA3Q9UL41 463 aa15.26■□□□□ 0.03
ERBB2-215ENST00000583391 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 PLXNB2O15031 1838 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 CYP2C8P10632 490 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 PDHBP11177 359 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 BMP3P12645 472 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 OSBPP22059 807 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 LIFRP42702 1097 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-215ENST00000583391 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 KCTD1Q719H9 257 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 ZNF654Q8IZM8 581 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 BRF1Q92994 677 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 MYL10Q9BUA6 226 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
ERBB2-215ENST00000583391 SLC45A1Q9Y2W3 748 aa15.25■□□□□ 0.03
ERBB2-215ENST00000583391 DOCK3Q8IZD9 2030 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 TRPA1O75762 1119 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 FLOT1O75955 427 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 ALDH1A1P00352 501 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 HOXA7P31268 230 aaPredicted RBP15.24■□□□□ 0.03
ERBB2-215ENST00000583391 APOBRQ0VD83 1088 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 IKQ13123 557 aaPredicted RBP15.24■□□□□ 0.03
ERBB2-215ENST00000583391 CRHR2Q13324 411 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 CATSPERGQ6ZRH7 1159 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 SMCR8Q8TEV9 937 aaPredicted RBP15.24■□□□□ 0.03
ERBB2-215ENST00000583391 NUP133Q8WUM0 1156 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 KIF2CQ99661 725 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 BEGAINQ9BUH8 593 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 GPCPD1Q9NPB8 672 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 PDRG1Q9NUG6 133 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 FBXO28Q9NVF7 368 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 RNF186Q9NXI6 227 aa15.24■□□□□ 0.03
ERBB2-215ENST00000583391 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
ERBB2-215ENST00000583391 KLF18A0A0U1RQI7 1052 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 TMEM232C9JQI7 657 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 DDAH1O94760 285 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 GOLGA8HP0CJ92 632 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 SNHG28P0DPA3 235 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 RXRAP19793 462 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 NEK4P51957 841 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 ZNF543Q08ER8 600 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 TOB2Q14106 344 aaPredicted RBP15.23■□□□□ 0.03
ERBB2-215ENST00000583391 APOA5Q6Q788 366 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 TMTC2Q8N394 836 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 JMYQ8N9B5 988 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 ZFYVE28Q9HCC9 887 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
ERBB2-215ENST00000583391 ZNFX1Q9P2E3 1918 aaKnown RBP15.23■□□□□ 0.03
ERBB2-215ENST00000583391 ADGRA2Q96PE1 1338 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 SPDYE16A6NNV3 312 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-215ENST00000583391 GOLGA8BA8MQT2 603 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 CA12O43570 354 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 TBC1D8O95759 1140 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 PARP1P09874 1014 aaKnown RBP15.22■□□□□ 0.03
ERBB2-215ENST00000583391 STAT2P52630 851 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 HERVK_113P62684 666 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 TROAPQ12815 778 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 GRM4Q14833 912 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 ASPRV1Q53RT3 343 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
ERBB2-215ENST00000583391 CCDC144CPQ8IYA2 1237 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 P2RX7Q99572 595 aaKnown RBP15.22■□□□□ 0.03
ERBB2-215ENST00000583391 SLF1Q9BQI6 1058 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 AGXT2Q9BYV1 514 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
ERBB2-215ENST00000583391 ZBTB43O43298 467 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 SLC16A2P36021 539 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 AK2P54819 239 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 GPATCH4Q5T3I0 446 aaKnown RBP15.21■□□□□ 0.03
ERBB2-215ENST00000583391 TTBK2Q6IQ55 1244 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 SYNE3Q6ZMZ3 975 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
ERBB2-215ENST00000583391 KIFC2Q96AC6 838 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 LARP6Q9BRS8 491 aaKnown RBP15.21■□□□□ 0.03
ERBB2-215ENST00000583391 PAGR1Q9BTK6 254 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 R3HDMLQ9H3Y0 253 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 SAGE1Q9NXZ1 904 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 FEM1BQ9UK73 627 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 PPP1R9AQ9ULJ8 1098 aa15.21■□□□□ 0.03
ERBB2-215ENST00000583391 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms