RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 VCANP13611 3396 aa14.89□□□□□ -0.03
TOP3A-215ENST00000583328 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 CYP2D6P10635 497 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 AKR1A1P14550 325 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 ICA1Q05084 483 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 FAAP100Q0VG06 881 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 TTF1Q15361 905 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-215ENST00000583328 ZNF792Q3KQV3 632 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 SLC9C2Q5TAH2 1124 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 CCDC129Q6ZRS4 1044 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 AACSQ86V21 672 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 NUP133Q8WUM0 1156 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 SDR42E1Q8WUS8 393 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 TOX2Q96NM4 488 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-215ENST00000583328 TSEN34Q9BSV6 310 aaKnown RBP14.88□□□□□ -0.03
TOP3A-215ENST00000583328 CNPY2Q9Y2B0 182 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 DIS3Q9Y2L1 958 aaKnown RBP14.88□□□□□ -0.03
TOP3A-215ENST00000583328 CDK5RAP2Q96SN8 1893 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 MYH1P12882 1939 aa14.88□□□□□ -0.03
TOP3A-215ENST00000583328 LAMA2P24043 3122 aaKnown RBP14.88□□□□□ -0.03
TOP3A-215ENST00000583328 WDR46O15213 610 aaKnown RBP14.87□□□□□ -0.03
TOP3A-215ENST00000583328 TIMP1P01033 207 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 ZNF865P0CJ78 1059 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-215ENST00000583328 AKR1B1P15121 316 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 STAT3P40763 770 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 ANKRD33Q7Z3H0 272 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 RIOX2Q8IUF8 465 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 CLEC10AQ8IUN9 316 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 SIAH1Q8IUQ4 282 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 LENG1Q96BZ8 264 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-215ENST00000583328 DYNLL2Q96FJ2 89 aa14.87□□□□□ -0.03
TOP3A-215ENST00000583328 DCP1AQ9NPI6 582 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-215ENST00000583328 PDE6AP16499 860 aa14.86□□□□□ -0.03
TOP3A-215ENST00000583328 ACLYP53396 1101 aa14.86□□□□□ -0.03
TOP3A-215ENST00000583328 CCDC174Q6PII3 467 aa14.86□□□□□ -0.03
TOP3A-215ENST00000583328 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.86□□□□□ -0.035e-8■■■■□ 21.2
TOP3A-215ENST00000583328 FAM184BQ9ULE4 1060 aa14.86□□□□□ -0.03
TOP3A-215ENST00000583328 ZBED9Q6R2W3 1325 aa14.86□□□□□ -0.03
TOP3A-215ENST00000583328 ZNF532Q9HCE3 1301 aa14.86□□□□□ -0.03
TOP3A-215ENST00000583328 ZNF236Q9UL36 1845 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 MOXD2PA6NHM9 499 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 ADAMTS4O75173 837 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 COPB2P35606 906 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 PPIGQ13427 754 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■■■■□ 25.5
TOP3A-215ENST00000583328 KCNA10Q16322 511 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 LCORLQ8N3X6 602 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 ATXN2LQ8WWM7 1075 aaKnown RBP14.85□□□□□ -0.03
TOP3A-215ENST00000583328 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 CCDC17Q96LX7 622 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 FBXO28Q9NVF7 368 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 ADAMTS5Q9UNA0 930 aa14.85□□□□□ -0.03
TOP3A-215ENST00000583328 MYO5AQ9Y4I1 1855 aaKnown RBP14.84□□□□□ -0.03
TOP3A-215ENST00000583328 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
TOP3A-215ENST00000583328 GRXCR1A8MXD5 290 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 VWA5AO00534 786 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 RAD21O60216 631 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 TMEM240Q5SV17 173 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 KLHDC9Q8NEP7 349 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 GLT1D1Q96MS3 346 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 PBX4Q9BYU1 374 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 PRDM12Q9H4Q4 367 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 ZHX1Q9UKY1 873 aaPredicted RBP14.84□□□□□ -0.03
TOP3A-215ENST00000583328 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 EXOC6BQ9Y2D4 811 aa14.84□□□□□ -0.03
TOP3A-215ENST00000583328 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
TOP3A-215ENST00000583328 PBX2P40425 430 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 CDK8P49336 464 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 AKNAD1Q5T1N1 836 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 ITPRIPQ8IWB1 547 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 AMOTL1Q8IY63 956 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 FTSJ3Q8IY81 847 aaKnown RBP14.83□□□□□ -0.04
TOP3A-215ENST00000583328 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 DDX11Q96FC9 970 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 ASB2Q96Q27 587 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 DNAJC2Q99543 621 aaKnown RBP14.83□□□□□ -0.04
TOP3A-215ENST00000583328 ARMT1Q9H993 441 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 THEGQ9P2T0 379 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 RAPGEFL1Q9UHV5 662 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 TBX21Q9UL17 535 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 MROH7Q68CQ1 1323 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 SYNRGQ9UMZ2 1314 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 SMCHD1A6NHR9 2005 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 PRUNE2Q8WUY3 3088 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 ROBO3Q96MS0 1386 aa14.83□□□□□ -0.04
TOP3A-215ENST00000583328 GOLIM4O00461 696 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 PRKAB2O43741 272 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 ACRP10323 421 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 CSF2RAP15509 400 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 IGFBP4P22692 258 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 MRPS5P82675 430 aaKnown RBP14.82□□□□□ -0.04
TOP3A-215ENST00000583328 CCDC85BQ15834 202 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-215ENST00000583328 FAM83BQ5T0W9 1011 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 CCSAPQ6IQ19 270 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-215ENST00000583328 C16orf59Q7L2K0 433 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 MSL3Q8N5Y2 521 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms