RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CABP7Q86V35 215 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 TRIM58Q8NG06 486 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 FAM81BQ96LP2 452 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 LY9Q9HBG7 655 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 PCDHA5Q9Y5H7 936 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 CLIC4Q9Y696 253 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 PXDNQ92626 1479 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 ATRNO75882 1429 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 TBC1D8BQ0IIM8 1120 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 ZNF174Q15697 407 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 SLC27A3Q5K4L6 730 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 SYT10Q6XYQ8 523 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 CSGALNACT2Q8N6G5 542 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 ZNF830Q96NB3 372 aaPredicted RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 SPAG5Q96R06 1193 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 MXD3Q9BW11 206 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 COL5A2P05997 1499 aaPredicted RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 PVALEFA0A1B0GWK0 134 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 BTBD18B2RXH4 712 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 H0YCG3 227 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 GBP1P32455 592 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 VAV2P52735 878 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 KCNB1Q14721 858 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 UTP14CQ5TAP6 766 aaKnown RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 PGBD1Q96JS3 809 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 GOLGA6L7A0A1B0GV03 622 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 MMP14P50281 582 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 PDE4DQ08499 809 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 PFKFB3Q16875 520 aaPredicted RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 TDRD12Q587J7 1177 aaKnown RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 AXDND1Q5T1B0 1012 aaPredicted RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 SYCE1Q8N0S2 351 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 PHKBQ93100 1093 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 ZSWIM5Q9P217 1185 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 RASAL2Q9UJF2 1139 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 NSFL1CQ9UNZ2 370 aaKnown RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 UBAP1LF5GYI3 381 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 N4BP1O75113 896 aaKnown RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 BCAMP50895 628 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 SUSD4Q5VX71 490 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 NELFBQ8WX92 580 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
RTTN-209ENST00000583043 ITIH6Q6UXX5 1313 aa6.54□□□□□ -1.36
RTTN-209ENST00000583043 A0A1W2PQC6 194 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 ZBTB22O15209 634 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 TCP1P17987 556 aaKnown RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 SLC9C1Q4G0N8 1177 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 FNBP4Q8N3X1 1017 aaPredicted RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 OGFOD1Q8N543 542 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 BBXQ8WY36 941 aaPredicted RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 FUCA2Q9BTY2 467 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 COA1Q9GZY4 146 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 EXOC7Q9UPT5 735 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 PPP2R2CQ9Y2T4 447 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 SPATA31A6Q5VVP1 1343 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 FAM237AA0A1B0GTK4 181 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 GCOM1H8Y6P7 765 aaPredicted RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 MYZAPP0CAP1 466 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 CHMP4BP1P59074 171 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 ALCAMQ13740 583 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 PROM2Q8N271 834 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 TRPC5Q9UL62 973 aaPredicted RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 LRRC63Q05C16 580 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 GRM4Q14833 912 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 CFAP58Q5T655 872 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 FAM196AQ6ZSG2 479 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 KRT26Q7Z3Y9 468 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 DAGLBQ8NCG7 672 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 ENGASEQ8NFI3 743 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 TEKT1Q969V4 418 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 MED4Q9NPJ6 270 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 ESYT2A0FGR8 921 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 RPN1P04843 607 aaKnown RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 GAP43P17677 238 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 MORC3Q14149 939 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 CALCRLQ16602 461 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 CHURC1Q8WUH1 139 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 MYO3BQ8WXR4 1341 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 SPZ1Q9BXG8 430 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 PEAK1Q9H792 1746 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 TNS2Q63HR2 1409 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 ABCB11O95342 1321 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 SALL1Q9NSC2 1324 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 ANO9A1A5B4 782 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 GSG1L2A8MUP6 293 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 KCNJ18B7U540 433 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 EPB41P11171 864 aaKnown RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 KCNJ12Q14500 433 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 IQCB1Q15051 598 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 VPS72Q15906 364 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 SPATS2Q86XZ4 545 aaKnown RBP6.53□□□□□ -1.36
RTTN-209ENST00000583043 CNPY4Q8N129 248 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 CNKSR1Q969H4 720 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 NOX5Q96PH1 765 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 CTNND2Q9UQB3 1225 aa6.53□□□□□ -1.36
RTTN-209ENST00000583043 HSF2BPO75031 334 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms